Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1628 |
Symbol | clpX |
ID | 5753363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 1967212 |
End bp | 1968492 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641287903 |
Product | ATP-dependent protease ATP-binding subunit ClpX |
Protein accession | YP_001554061 |
Protein GI | 160874745 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000953575 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGACA ACAAAAATAA TGGTGACAGC GGTAAATTGC TGTACTGCTC TTTTTGCGGA AAGAGCCAGC ATGAAGTCAG AAAACTCATT GCTGGCCCAT CAGTGTATGT ATGCGACGAA TGTGTTGAGT TATGTAACGA CATCATTCGC GAAGAGATTA AAGAAATCTC TCCAAAGCGC GATAGCGATA AGTTACCGAC ACCACATGAG TTGCGTGCAC ATTTAGACGA TTATGTGATT GGCCAAGACA GGGCGAAGAA AGTGCTATCT GTGGCAGTGT ATAATCACTA TAAGCGTTTG AAAAATGCGT CGCCTAAAGA TGGTATCGAG CTGGGTAAGA GTAACATTTT GCTTATCGGT CCAACGGGTA GCGGTAAGAC GCTGTTAGCT GAAACCCTTG CGCGTTCACT CAATGTACCT TTCACTATGG CCGATGCCAC GACACTGACT GAAGCGGGTT ATGTGGGTGA AGACGTTGAA AACATCATTC AAAAGTTGCT GCAAAAGTGC GACTACGATG TAGAGAAAGC GCAGCGTGGT ATCGTTTATA TCGATGAAAT CGATAAAATT AGCCGTAAGT CAGACAATCC ATCGATCACC CGTGACGTAT CGGGTGAGGG CGTGCAGCAA GCGCTGCTTA AGCTGATTGA AGGTACTGTT GCCGCGGTTC CACCACAAGG TGGCCGTAAG CATCCACAGC AAGAATTCTT ACAAGTCGAT ACTTCTAAGA TCCTGTTTAT CTGTGGCGGT GCGTTTGCAG GGCTTGAGAA AGTGATTGAG CAACGTGCAC ACGTTGGTTC GGGTATCGGT TTCGGTGCTC AGGTAAAAGG CGAAAAAGAG AAGGCGACGA TTTCTGAAAC CTTAACTCAA GTTGAACCTG GCGATTTGGT CAAATATGGC TTAATTCCTG AGTTCATCGG CCGTCTGCCT GTGGTTGCGA CTCTGACTGA GCTGGATGAA GAAGCCCTAG TGCAAATTTT ATCTCAACCT AAAAATGCCC TGACTAAGCA GTACAGTGCG TTATTTGAGA TGGAAGGCGT CGAGCTTGAG TTCCGCGAAG ATGCACTTAA AGCGATAGCA CACAAGGCGA TGTCACGTAA GACAGGTGCC CGTGGTTTAC GCTCAATCGT TGAAAGTATT CTACTGGATA CTATGTACGA TATTCCTTCA GTCGATGGTG TTGTGAAGGC CGTTGTCGAT GAATCAGTGG TGAAAGGTGA ATCTGCACCT ATCCTGATTT ATGAGCACAA TGAAGCCCAA GCAGCCTCTG GCGAGCAATA A
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Protein sequence | MGDNKNNGDS GKLLYCSFCG KSQHEVRKLI AGPSVYVCDE CVELCNDIIR EEIKEISPKR DSDKLPTPHE LRAHLDDYVI GQDRAKKVLS VAVYNHYKRL KNASPKDGIE LGKSNILLIG PTGSGKTLLA ETLARSLNVP FTMADATTLT EAGYVGEDVE NIIQKLLQKC DYDVEKAQRG IVYIDEIDKI SRKSDNPSIT RDVSGEGVQQ ALLKLIEGTV AAVPPQGGRK HPQQEFLQVD TSKILFICGG AFAGLEKVIE QRAHVGSGIG FGAQVKGEKE KATISETLTQ VEPGDLVKYG LIPEFIGRLP VVATLTELDE EALVQILSQP KNALTKQYSA LFEMEGVELE FREDALKAIA HKAMSRKTGA RGLRSIVESI LLDTMYDIPS VDGVVKAVVD ESVVKGESAP ILIYEHNEAQ AASGEQ
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