| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1588 |
|---|
| Symbol | |
|---|
| ID | 5753320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 1914019 |
|---|
| End bp | 1914897 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641287860 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001554021 |
|---|
| Protein GI | 160874705 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGACTA TTTCTAATCT CACTAAAACT TATGATAACG GTGTTAAAGC ACTTGATGGT
GTTGATTTAA CGATTTCCAA AGGGATGTTT GGTTTACTCG GACCCAATGG CGCGGGCAAG
TCATCACTGA TGCGTACCAT TGCCGCCCTG CAAAGTGCAG ATAGCGGTAG CATAGTGTTT
GACGGTATTG ATGTATTAGC CGACCCTCAA GCGCTGCGTA AAACCTTGGG ATATTTGCCT
CAGGACTTTA ATGTTTATCC GCGTATTAGC GCCTATGACT TGTTAGATCA TTTAGCCATT
CTTAAGGGGA TTAATCAGAG CAAGCTGCGT AAAGAAGCGG TTGAAGGATT ACTGGCTCAC
ACCAATCTTT ATCAGCATAA AAATAAAGCT GTGAGTGGTT TCTCTGGCGG TATGCGTCAG
CGCTTTGGTA TTGCGCAGGC CTTGCTTGGT GATCCTAAGC TATTGATTGT GGACGAGCCT
ACCGCGGGTC TCGATCCTGA AGAACGTAAC CGTTTCCATA ACTTGTTGGT GAGTTTAGGC
GAGGAAAAAG TGGTGATCCT CTCAACGCAT ATTGTTGAGG ATGTATCTGA ACTCTGCGCC
AATATGGCGG TATTAGCATC GGGTAAAATT CTGCTTCAAG GCAATCCTCA CCAATTAGTG
AGTGAGTTAA CGGAAAAGAT TTGGACTAAG ACTGTGACTC AAGCACAGGC GCAGGAACTC
GAAGCGCAAT TGCCAGTGAT TTCTAAGCGG TTATTCGCGG GCCGCACAGT ACTGAATGTG
ATGGCAGAAA CCTGCCCCGA AGGATTTACC CCAGCGACAG CTGGGCTGGA AGATCTGTAT
TTTTCGACCT TACACAGTCA TCGCCGTCAG GCTGCCTAG
|
|---|
| Protein sequence | MLTISNLTKT YDNGVKALDG VDLTISKGMF GLLGPNGAGK SSLMRTIAAL QSADSGSIVF
DGIDVLADPQ ALRKTLGYLP QDFNVYPRIS AYDLLDHLAI LKGINQSKLR KEAVEGLLAH
TNLYQHKNKA VSGFSGGMRQ RFGIAQALLG DPKLLIVDEP TAGLDPEERN RFHNLLVSLG
EEKVVILSTH IVEDVSELCA NMAVLASGKI LLQGNPHQLV SELTEKIWTK TVTQAQAQEL
EAQLPVISKR LFAGRTVLNV MAETCPEGFT PATAGLEDLY FSTLHSHRRQ AA
|
|---|
| |