Gene Sbal195_1548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_1548 
Symbol 
ID5753280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp1867190 
End bp1867891 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content51% 
IMG OID641287820 
ProductTetR family transcriptional regulator 
Protein accessionYP_001553981 
Protein GI160874665 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTTA TTCCCGGTCG TCCTAGGGGC GTCGTTCCAT TTAGCGCCCA ACCTGAATCG 
CCGCCCATTC TCGGTCGTCC GAAGGGAAAC TCAGACGCGC GTCAACGCTT AATAACCGCT
GCCTTAAGTC TTTTTAGTCA TCGCAGTTAT CCTACTGTGT CTACCCGTGA AATCGCCCGC
GAAGCCGAGG TCGATGCCGC GCTTATCCGT TACTATTTTG GTTCGAAAGC GGGTTTGTTC
GAACAAATGG TGCGAGAAAC CCTTGAGCCC GTATTAACCC GTTTACGCGA AATATCCGCG
GCTGAAGCGC CGAATAATGT CGGCGAAATC ATGCAGACAT ACTATCGCGT TATGGCGCCC
AACCCTGGCT TGCCACGGCT GATTATACGG GTGTTGCAGG AGGGCGATGG CTCAGAACCC
TATCGGATTA TCTTGTCCGT GTTTGAGCAA GTGTTAACTC TGTCGCGGCA ATGGCTCGAA
TCCACGTTAG TTAATTCGGG ATTATTAAAA GAGGGTGTCG ACCCCGATTT AGCACGGCTA
AGTTTTGTGA GTCTTATGGT ATTTCCGCTT ATTGCCCCGC CCGTATTAAT GCGTCAGTTC
GGCTTTTTTG ATGCCGATGC TGCGCTTTTG CAGCGCTTAG CTCTGCACAA TATGCAGGTT
TTTACGCAGG GACTGTTATG TGAACCAAGG AGCCAGTCAT GA
 
Protein sequence
MSLIPGRPRG VVPFSAQPES PPILGRPKGN SDARQRLITA ALSLFSHRSY PTVSTREIAR 
EAEVDAALIR YYFGSKAGLF EQMVRETLEP VLTRLREISA AEAPNNVGEI MQTYYRVMAP
NPGLPRLIIR VLQEGDGSEP YRIILSVFEQ VLTLSRQWLE STLVNSGLLK EGVDPDLARL
SFVSLMVFPL IAPPVLMRQF GFFDADAALL QRLALHNMQV FTQGLLCEPR SQS