Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1517 |
Symbol | |
ID | 5753249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 1828046 |
End bp | 1829584 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641287789 |
Product | transcriptional regulator, TyrR |
Protein accession | YP_001553950 |
Protein GI | 160874634 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG3283] Transcriptional regulator of aromatic amino acids metabolism |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.216053 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCTTGG AAGTCAGCTG TCAGGATCGT GTTGGTTTAG CCAAAGATAT CTTAGTCGTA TTAGAGCGTT ATGGTATTAA TTTAATTGCC ATTGATGCCA GTAACCAAGG ATTCCTGTAC TTACAATTTG CCGAAATCAG TTTTGAAACC TTAAGTGCCT TGATGCCGCA GATCCGCAAA GTGGAAAGTG TCCACGATGT GCGTACTGTG TCGTTTATGC CCTCAGAGCA AGAACATTAC GCCCTTAAAA CCTTGCTCAA AACCTTACCC GACTCCGTTT TCTCCATCGA TGCTAAAGCG CGTATTCGTA TCGTTAACGA GTCCGCCTTG CTCAATATCG GTATGGGTGA GCACGAAGTG CTCGAAGAGT CGCTCAATCA TTGGGTGCAA GGTTTTAACT TCAGCCGCTG GTTGAGCGAA AGCCAAGTCT TACCGCAAGC GGCGAGGGTA CAAATTGGTC CAAACGAATA TTTAGCCGAA ATGCTGCCGA TTTACCTGCC CGATGAGGAT GAGAAAACTA TCTTAGTTGG CGCTGTGGTG TCGCTAAAAT CCCCCGCGCG GGTTGGAAAA CAATTTAACG CGCTGCAGAA TCAAACTACT GGCTTTGAAA ATGTATTAGC CAGCAGTGAC AAAATGAAGG AAGTGCTTAA GCAAGCGCGG CGGATGGCCC AGCTCGATGC GCCTTTATTG ATCACAGGTG AAACGGGTAC TGGTAAAGAA TTAATGGCCA GAGCCAGCCA CGATGCCAGC ATGCGCCGCG AGAAACCCTT TATCGCCATC AACTGCGCCG CTCTGCCCGA CAGCGCCGCC GAAGAAGAAC TATTCGGTTA TGTCAGTCAG GGCAAAGTCG TTAAACGGGG TTTCTTTGAA GAAGCTAAAG GCGGCACAGT ATTTCTCGAT GAAGTGGCTG AGATGTCCAA GGCCGCACAA GTTAAGCTGC TTCGTCTATT GCAAGATGGC ACCTTTAGAC GTATCGGCGG CGATGAAGAA GTCCGTGCCG ATGTGCGGAT CATTTGCTCA ACCCAGAAAA ATTTAGCCGA ACTGTGCCAA ACCGGTGAGT TTAGGGAAGA TTTGTACTAT CGCATCCATG TGCTCAGTTA TCACATACCG TCACTGCGCG AGCGTAAAGT CGATATCATT CCACTGACAG AAATGTTCCT CGAACATTAC AGCCAACAGT TATCTAGCCC AGTGCGACGG ATTTCGGCCC AGTGCCGCGA TCATTTGCTC ACCTACGCTT GGCCAGGTAA CGTACGCCAA TTAAAGAACG CAGTATTTAG AGCTGTGTCT ATGTGGGATG GTTCGGCCGA GTTGACGGTA GAACAATTAA AACTGCCGTC CTACGCCGAA GGTTTTGGTT ACTTTGACAA TGAGTTTGAA GGCAATCTCG ACGATGCGAT GAAGCAGTTT GAAGCGAGTC TGTTGCGTCG ATTATATCCA GCCTATCCGA GTACTCGTCA GTTAGCGAAA AAGCTCGGGG TGTCGCACAC CGCTATTGCC AATAAGCTGC GTGAGTACAA GATAGCCAAG CGTCGTTAA
|
Protein sequence | MRLEVSCQDR VGLAKDILVV LERYGINLIA IDASNQGFLY LQFAEISFET LSALMPQIRK VESVHDVRTV SFMPSEQEHY ALKTLLKTLP DSVFSIDAKA RIRIVNESAL LNIGMGEHEV LEESLNHWVQ GFNFSRWLSE SQVLPQAARV QIGPNEYLAE MLPIYLPDED EKTILVGAVV SLKSPARVGK QFNALQNQTT GFENVLASSD KMKEVLKQAR RMAQLDAPLL ITGETGTGKE LMARASHDAS MRREKPFIAI NCAALPDSAA EEELFGYVSQ GKVVKRGFFE EAKGGTVFLD EVAEMSKAAQ VKLLRLLQDG TFRRIGGDEE VRADVRIICS TQKNLAELCQ TGEFREDLYY RIHVLSYHIP SLRERKVDII PLTEMFLEHY SQQLSSPVRR ISAQCRDHLL TYAWPGNVRQ LKNAVFRAVS MWDGSAELTV EQLKLPSYAE GFGYFDNEFE GNLDDAMKQF EASLLRRLYP AYPSTRQLAK KLGVSHTAIA NKLREYKIAK RR
|
| |