| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1497 |
|---|
| Symbol | |
|---|
| ID | 5753229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 1802108 |
|---|
| End bp | 1803583 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641287769 |
|---|
| Product | tRNA(Ile)-lysidine synthetase |
|---|
| Protein accession | YP_001553930 |
|---|
| Protein GI | 160874614 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
|---|
| TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain
[TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGTTA AGTTTGATGA GCCATTGGCA GCTTGCGATC TCAGCGCGCA TATTAGTGCT
TTTTTGACGG CGCAGTCGTT AGCGCCTGAC TGCAAGTTAG TGCTGGCTTA CAGTGGCGGT
GTTGATTCCG AAGTTTTGGC CTTTGGCTTA AGTCAGTTTG CGCGGCAACA TCCCGAGTTT
CATTATCAAC TGGTGTATGT GCACCATGGC CTCAGTGATA ACGCTGATTC TTGGGCGCAG
CATTGTCTTG AGCGCGGTCA ACATTATGGT TTGCCCGTGA CGGTTGAGCG AGTGACAGTT
AATCGCGGAC CCAGATTAAG CCTTGAAGCC GAAGCACGAA AAGTCCGTTA TCAAGCGATT
GAACGGCATT TAAGTGCAAA TGATGTGTTG CTGACGGCCC ATCATGAAGA TGATCAGCTG
GAAACTATTC TGCTGGCGCT GAAACGTGGT CAGGGCCCGA AGGGGCTGGC GGCCATGGGG
CAAGTACAAG CATTAGCACA AGGCAGACAA CTGCGGCCGT TATTGGATAT TAGCCGTGAG
CAAATTGAAG CCTACGCAAA ACAGCAAGGC TTAGTGCATA TCGAAGATGA AAGTAATCAA
GACGATAAGT ACGATCGTAA TTTTTTACGT TTAGAAATCA TTCCACGCTT GAAAGCGCGT
TGGCCGAGTA TTGCGACAAC CGCGAGTCGC AGCGCGGCAT TGTGCGCTAA GCAACAGGCA
ACGTTGGATG TGCAGGTCAG TGAACGTTTA CCTTTATGGT TAACCCAAGC GCCTTACCAT
ACTCAAAGTG TATTCAAGCT CGATGGTTTT GCCGAGCAGT CAGCCGATTG GCAAGCATTA
CTCTTGCGGG GTTTTATCGA ATCACAAGGT TTTGCCTTGC CATCAAAGGT GCAGCTTAAT
CAGATCATCA CTCAGCTTTT AACCGCGAAA GATGATGCCA AAGTGCATAT TCGTGTCGGT
GAATGTGAAA TCCGCCGCTT TGCTAATCAA GTGTATTTAT TTAAGTATCA AGCTTGTCCG
CGTCATGTTA AGCCTGCGAG CTGGGCATTT CCTTCGCAGC TCCTAAATCC TTTAGTGCAG
GGCGATGTTA CTCAAGTGGA CGTGACTCAA TCAGACGTTA CTCAATTGGA TGTGACTCAA
TTAGACGTGA AACCTGCGGG TGTTACTTGT GGTGAGACGA TACGTCTCAG TGCCTCTAGA
CAAGGGCCTA GAGCTCGCTT TCCTCGGCCA GATGAAGTGT TGAGTGTGCG ATATCAACTT
GCGGGGCAAT ATCGCTGTCA TCCCCATTCC CGTGGCAAGG GCCGAGAATT AAAGAAACTG
TGGCAAGAGT TTGCCGTTCC GCCTTGGGTA CGTGAAAAGA TCGGTTTCGT GTTCTATAAC
GAGCAACTGG TGATGGCGAT TGGGCTGTGG GTTGAAAAAA GCTTTATTCT TGAGTTGAAT
GGACTCGGTT TGCAGGTCTC TCAAACTTCT GTTTAA
|
|---|
| Protein sequence | MSVKFDEPLA ACDLSAHISA FLTAQSLAPD CKLVLAYSGG VDSEVLAFGL SQFARQHPEF
HYQLVYVHHG LSDNADSWAQ HCLERGQHYG LPVTVERVTV NRGPRLSLEA EARKVRYQAI
ERHLSANDVL LTAHHEDDQL ETILLALKRG QGPKGLAAMG QVQALAQGRQ LRPLLDISRE
QIEAYAKQQG LVHIEDESNQ DDKYDRNFLR LEIIPRLKAR WPSIATTASR SAALCAKQQA
TLDVQVSERL PLWLTQAPYH TQSVFKLDGF AEQSADWQAL LLRGFIESQG FALPSKVQLN
QIITQLLTAK DDAKVHIRVG ECEIRRFANQ VYLFKYQACP RHVKPASWAF PSQLLNPLVQ
GDVTQVDVTQ SDVTQLDVTQ LDVKPAGVTC GETIRLSASR QGPRARFPRP DEVLSVRYQL
AGQYRCHPHS RGKGRELKKL WQEFAVPPWV REKIGFVFYN EQLVMAIGLW VEKSFILELN
GLGLQVSQTS V
|
|---|
| |