Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1491 |
Symbol | lpxD |
ID | 5753223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 1794155 |
End bp | 1795180 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641287763 |
Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
Protein accession | YP_001553924 |
Protein GI | 160874608 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000340035 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAGTG TGACTTTAAA AGAGCTAGGC CTGTTACTAG ACGGTGATAT TCAAGGCGAC GAAACGCTAA TTATTAATAG TGTGGCGACC TTAGAACATG CCAAAGCAGG TCAAATCTCT TTTTTAGCCA ACAGTAAATA TCGCTCTCAG CTTGAGGCAA CTCAAGCGAG TGCGGTGTTA TTGTCAGCTA AAGATGCGCA GGATTATCAA GGTACTGCGT TAATTGTAAA AGATCCTTAT GTCGGTTTTG CCCGTGTTGC CCAGTATTTG GACACTACGC CTAAAGCGGC GGTGGGTATC CATCCTTCGG CTCAAATTGA CGCTTCTGCC CATATAGGTG AAGGTGTTGC GATTGGGGCG AATGCGGTTA TTGGTGCGAA CGTCATTTTA GGTGAAAATG TCCAGATAGG TGCCGGTGTA GTGCTCGGAC AAGATGTGGT TATTGGCTCA AAAACGCGTT TGTGGGCTAA TGTCACTGTC TATCACGATG TGCATTTAGG ACAAGATTGT ATTATCCATT CGGGCGCTGT ATTAGGCTCC GATGGTTTTG GTTATGCCAA TGAACGCGGT CAGTGGATTA AAATCCCACA AACGGGCGGC GTTCGTATCG GCGATCGGGT TGAAATAGGT GCTAATTCAA CGGTAGATCG CGGTGCATTA GGCCATACCG AGATCCACGA TGGGGTGATT ATCGATAACC AAGTACAAAT TGCCCATAAC GATATTATCG GTGAGAATAC CGCTATCGCA GGCAGTACGA CTGTCGCAGG CAGTGTCACC ATAGGTAAAT ATTGTATTAT TGGTGGTAGT TGTGCCATCG CAGGTCATTT GAGCATTGCC GATGGTGTGC ATGTGTCTGG TGGGACTAAC ATTACCAGTA CTATGCGTGA GCCTGGTTTA TACTCTTCTG CCACTGTGGC AATGGACAAT AAACTTTGGC GTAAAAACAC AGTTCGTTTC CGTCAGTTAG ATGAACTGTT CCATCGTGTT AAAACGTTGG AAAAAAATTT AAAAACACCA GATTAA
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Protein sequence | MNSVTLKELG LLLDGDIQGD ETLIINSVAT LEHAKAGQIS FLANSKYRSQ LEATQASAVL LSAKDAQDYQ GTALIVKDPY VGFARVAQYL DTTPKAAVGI HPSAQIDASA HIGEGVAIGA NAVIGANVIL GENVQIGAGV VLGQDVVIGS KTRLWANVTV YHDVHLGQDC IIHSGAVLGS DGFGYANERG QWIKIPQTGG VRIGDRVEIG ANSTVDRGAL GHTEIHDGVI IDNQVQIAHN DIIGENTAIA GSTTVAGSVT IGKYCIIGGS CAIAGHLSIA DGVHVSGGTN ITSTMREPGL YSSATVAMDN KLWRKNTVRF RQLDELFHRV KTLEKNLKTP D
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