Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1489 |
Symbol | |
ID | 5753221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 1791109 |
End bp | 1793589 |
Gene Length | 2481 bp |
Protein Length | 826 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641287761 |
Product | surface antigen (D15) |
Protein accession | YP_001553922 |
Protein GI | 160874606 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00390259 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATTGA ATAAACTTTT TGCCTCGATG TTATTCGTCG GTGCGTCGTT TTCAGGGACT GTGTTGGCTG ATACTTTCCA ACCGTTTGAA GTGACCGACA TCCAAGTTGA AGGTTTGCAG CGAGTTGCAC TCGGTGCTGC CCTGTTAAGC TTACCAGTAA AAGTAGGTGA CACTGTTGAC CAGTTAAGAA TTCAACAAGC CATTAAAAGC TTGTATGCAT CGACTAACTT TGAAAATGTC TCCGTGAGCC GAGATGGCGG CGTATTAGTG GTGAAAGTCA CTGAACGTCC TACCATCAGT GCCGTGACAT TCGATGGCAA CAAAGACATT AAAGACGAAC AGTTACAGGA AAGTCTGGAC GGTTCTGGCG TTAAAGTCGG TGAGTCGCTC GATCGCACTA TGTTGACCGG TATTGAAAAG GGTCTGCAGG ATTTCTACTA CGGCGTGGGT AAATACGGCG CTAAAGTGGA AGCTCAAGTG ATCAACTTAC CCCGTAACCG GGTTGAGCTG AAATTTAAGT TCACCGAAGG TTTAGCGGCC GAAATACGCC AAATTAACGT GGTCGGTAAT CATGAGTTCA CCGATGCTGA GTTGATTGGC ATGCTGGAAC TTAAAGATTA TGTGGCTTGG TGGGATCTGT TCGGCGAACG CCGTTATCAG AAACAAAAGC TGCAGGCTGA TCTCGAGACC ATCAAAACCT ATTATCACAA TAAAGGTTAT ATCCGCTTTG AAGTCACCTC GACTCAAGTG GCGATGACGC CTGACCGTAA AGGTTTATAT ATCACCATCA ACGTAGATGA AGGTGAGAAA TATAAAGTTA AAGAAGTAAA CCTGACGGGT GATTTGATGG GCCGTGAAGA GTTGATGAAA TCAATTCTGC CGATCAAAGC GGGTGATATG TACAACGGCG GTGATGTGAC TTTCACCGAA GAAATGTACA GCAAATATTT AGGCCGCTTC GGTTATGCCT ACCCAGAAGT CAAAACGTAT CCTGAAATTG ATGATAAGAC TAAAGAAGTG ACCTTAAACA TCAATGTTAA ACCGGGTAAA CGTGTTTACG TGCGTGCGAT TAACTTCACT GGTAACACAG TGACCAAAGA TGAAGTGATG CGCCGTGAAC TGCGTCAGAT GGAAGGGGCT TGGTTAAACT CAGCGCAAGT TGAGCAATCT AAAGCGCGTC TTAACCGTTT GGGCTTCTTC GAAACCGTTG ACACTGAAAC CATTCAAGTG CCAGGTACCG ATGATTTAGT CGATGTTGCG GTGAAAGTGA AAGAGCAGCC GTCGGGCTCA TTCAACGCCG GTGTCGGTTA TGGTACTGAA TCAGGCCTGA GCTTACAGTT TGGTGTGCAG CAAAATAACT TCTTAGGCAC AGGTAACCAA GCGGGTATCA GCTTGAGCAC CAACAAGTAT TCTAAGAACG TTAACTTATC TTATACCGAT CCGTATTGGA CGAAAGATGG CGTGAGTTTA GGGGGGAGCG TTTATTGGAG CGAGTTTGAC GCCAATGAAG CGAACTTAGA GCGTTATAAA AACAGTTCTT ACGGTGTGGC GTTGAACTCG GGTTTCCCGA TCAACGAATA CAATCGTATC AATGGTGGCA TAGGCTATCG TCATAACACG ATTTCTGAAA TTTCTGCCTA TGAACAAGCA CTGCGTTTCT ATAACATCTA CCGTGATGAC GATCCAAATG CGGACTTAAG TTTTGATAAC TTTGAACTGA GTCTGGGCTG GTATCGTAGC ACCTTGAACC GTGGCACTTT CCCAACAGAC GGCTCGTCTC AGCGTTTGAA CGGTAAAATG ACTTCGCCAG GGTCTGATTT ACAGTATTTT AAGACAGACT TTGACACTAA CTTCTATTTC CCTATTAACC GTAGTCAGAG CTTTGTGCTC TTGGCCCGTG GTCGATTAGG TTATGGTAAC GGTTATGGTC AATTTAATGA TAACGACCAA ATTCTGCCTT TCTGGGAAAA CTATTACTCA GGTGGTAGCA GTTCACTGCG TGGCTTTAAG TCTAACTCTG TGGGGCCTCG TTCATTCTAT CTCTACCGAG GTAGTGAACC ATGTGCACCG GATCCATCGG GCGATGGTTG TAGTTTGCCG GGCGATCCTA ACAGTATCCA AGTGAGTTCT GGCCGTTCAA TCGGTGGTAA CGCCCTTGCG ACAGCGAGCA TGGAGTTGAT TGTACCGACG CCATTCTTGG ATGAGGCTTA CACAAACTCA GTTCGTACGA GTTTCTTCGT TGATGCGGGT AACGTTTGGG ATACTGAGTT TGATTACAAT GCATATCAAA CACTTCCAGC GGACGAGTTT GCTAAGTTAC AGGACTACAG TGATCCAGCA CGTTTACGCG CTTCTTGGGG CTTAAGTGTG CAGTGGTTAT CACCTATGGG TCCTATGGTG TTTAGCTTAG CGTGGCCGAT TAAAGAATAC GAAGGCGACC AAACAGAGAT CTTCTCTTTC AATATTGGCA AAACTTTTTA A
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Protein sequence | MRLNKLFASM LFVGASFSGT VLADTFQPFE VTDIQVEGLQ RVALGAALLS LPVKVGDTVD QLRIQQAIKS LYASTNFENV SVSRDGGVLV VKVTERPTIS AVTFDGNKDI KDEQLQESLD GSGVKVGESL DRTMLTGIEK GLQDFYYGVG KYGAKVEAQV INLPRNRVEL KFKFTEGLAA EIRQINVVGN HEFTDAELIG MLELKDYVAW WDLFGERRYQ KQKLQADLET IKTYYHNKGY IRFEVTSTQV AMTPDRKGLY ITINVDEGEK YKVKEVNLTG DLMGREELMK SILPIKAGDM YNGGDVTFTE EMYSKYLGRF GYAYPEVKTY PEIDDKTKEV TLNINVKPGK RVYVRAINFT GNTVTKDEVM RRELRQMEGA WLNSAQVEQS KARLNRLGFF ETVDTETIQV PGTDDLVDVA VKVKEQPSGS FNAGVGYGTE SGLSLQFGVQ QNNFLGTGNQ AGISLSTNKY SKNVNLSYTD PYWTKDGVSL GGSVYWSEFD ANEANLERYK NSSYGVALNS GFPINEYNRI NGGIGYRHNT ISEISAYEQA LRFYNIYRDD DPNADLSFDN FELSLGWYRS TLNRGTFPTD GSSQRLNGKM TSPGSDLQYF KTDFDTNFYF PINRSQSFVL LARGRLGYGN GYGQFNDNDQ ILPFWENYYS GGSSSLRGFK SNSVGPRSFY LYRGSEPCAP DPSGDGCSLP GDPNSIQVSS GRSIGGNALA TASMELIVPT PFLDEAYTNS VRTSFFVDAG NVWDTEFDYN AYQTLPADEF AKLQDYSDPA RLRASWGLSV QWLSPMGPMV FSLAWPIKEY EGDQTEIFSF NIGKTF
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