Gene Sbal195_1445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_1445 
Symbol 
ID5753174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp1734422 
End bp1736113 
Gene Length1692 bp 
Protein Length563 aa 
Translation table11 
GC content48% 
IMG OID641287715 
Producthypothetical protein 
Protein accessionYP_001553879 
Protein GI160874563 
COG category[I] Lipid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
[COG2453] Predicted protein-tyrosine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAGCA AAATCCACAT CAAATATTTC TACTTAGCGG GTGCCGTGTT GCTAGCCTAT 
TTTGCGGTAA CGGGCACGTC CCCCCTGCTC ACCTTTATTT GGGCTTGGAC AAGCCTGTCG
CTGTTTTTAG TCGGTTCAGC CTACTGGTTT AATCTGGCTA GCATTTTTAG AAAGCGCCAA
GATGGCACTA TCCCTTGGTA TATTCGCTGG AGCTTTATTC CGTTTCTATT GGGCAGCCGG
CTGTATAATC ATTGGGCGAG AAAACGCGAC TCTGTGCCGT CGATGCAAAA GATAGATGAG
CAGTTGTATC TCGGCTGCCG ATTATTTTCT GCGGATCTGG AGAAAATCAA AGCCAATAAG
ATCACCGCAA TTCTTGATGT GACCGCCGAA TTTGATGGCT TAGATTGGTC GCAGTTTGAA
GATCATATCG AGTATTTAAA CATTCCCATC CTCGACCATA GCGTGCCGAC CAGCGCCCAG
CTCAATCAAG CCGTTAACTG GTTGCATCGC CAAGTGCGCG CCAATAAACA GGTGCTGATC
CACTGTGCTA TGGGGCGTGG TCGTTCAGTA CTGGTGCTCG CCGCCTATTT AGTCTGTAAA
GATAAACAGC GTAACTTCGC CGAAGTATTG CAACAAATTA AGCAAGTCCG CAAAACCGCG
GGCTTAAACA AATGGCAATT ACGCGCCCTT GAACACATGC TCAAGCAAGG CAAAATCAAC
ATCCATAAAG TGGCGTGGAT TATCGCCAAC CCTGTCTCTG GCGGCGGCAA ATGGCAACAA
TATGGCGAGC AAATCCAAGA CGAACTAAAA GCCTATTTTG ACCTAACGTT AAAACTCACT
ACCGAAAATA TCAGCGCAAA TACCTTCGCC AAAAAAGCCC GCAATAGCGG CGCAGATATC
ATTATTGCCT GTGGTGGCGA TGGCACAGTG ACAGAGGTAG CATCGGAAAT AGTGAACACT
GATATCGCCT TAGGGATCAT TCCCTTAGGC ACGACTAACG CCCTCAGCCA CGCGCTATTT
GGTTTAGGCA GTAAGCTCAT TCCTGTCTCT CAGGCGCTGG ACAATATTAT CCAAGGGCAT
TACCAAGCCA TTGATACAGC TCGTTGTAAT GAACAATTAG TCTTGTTACT TGTGGGGATT
GGCTTTGAAC AGCAGATGAT TGAATCTGCC AACCGTGAAC GTAAAAATGC CCTCGGCCAG
TTTGCCTACC TCGATGGTTT ATGGCGCGCT GTCAATGCCG ATATCACTTT AACCGTACAG
CTCAGCTTAG ATGATGCCGA GCCCACAACA TTGACCACCC ATAGCCTCAT TGTTGCCAAT
GCCGCCCCGT TTACCAGCGT ATTAGCGCAG GGCGATGGCG AGCCAAACAT GACAGATGGC
CTGCTCGATA TTACCTGGCT AGATTCAGGG GATGAACCCA AGGAACAGCT CCTTAGTCTG
GCCGAATTAG CCATTGCTGG ATGGGTAAAA GAAGGTAATA AAGACACAGA TGCAAAGTTA
CCTAGTGCGC CTTCTACCGC GACCAAAGTC CACCACGCCC ATGCGAAAAA AGTGAATATT
AGTAGTCAGC CCAAGTGTAA ATATGTGATT GATGGCGAAA TCTTTGAACC CGCAGATCTC
ACCATTGAAG TCCAACCCGC ATCCCTTAAG GTGTTTGTGC CTTATCAGGA AATAACTGAA
GAGGATGGGT GA
 
Protein sequence
MLSKIHIKYF YLAGAVLLAY FAVTGTSPLL TFIWAWTSLS LFLVGSAYWF NLASIFRKRQ 
DGTIPWYIRW SFIPFLLGSR LYNHWARKRD SVPSMQKIDE QLYLGCRLFS ADLEKIKANK
ITAILDVTAE FDGLDWSQFE DHIEYLNIPI LDHSVPTSAQ LNQAVNWLHR QVRANKQVLI
HCAMGRGRSV LVLAAYLVCK DKQRNFAEVL QQIKQVRKTA GLNKWQLRAL EHMLKQGKIN
IHKVAWIIAN PVSGGGKWQQ YGEQIQDELK AYFDLTLKLT TENISANTFA KKARNSGADI
IIACGGDGTV TEVASEIVNT DIALGIIPLG TTNALSHALF GLGSKLIPVS QALDNIIQGH
YQAIDTARCN EQLVLLLVGI GFEQQMIESA NRERKNALGQ FAYLDGLWRA VNADITLTVQ
LSLDDAEPTT LTTHSLIVAN AAPFTSVLAQ GDGEPNMTDG LLDITWLDSG DEPKEQLLSL
AELAIAGWVK EGNKDTDAKL PSAPSTATKV HHAHAKKVNI SSQPKCKYVI DGEIFEPADL
TIEVQPASLK VFVPYQEITE EDG