Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1402 |
Symbol | |
ID | 5753131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 1680422 |
End bp | 1681366 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641287672 |
Product | porin |
Protein accession | YP_001553836 |
Protein GI | 160874520 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0177121 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0236539 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAACG TTTTTTGTAA AACTCTACTT GCTTCTGCGC TAGCTTCTGC AACTCTGGCT TCAGCTTATG CCGCTGAGCC ACTGACTGTT TATGGTAAGT TGAATGTCAC TGCTCAATCA AATGATGAGA AAGGTGATGC TACAACAACT ATTCAAAGTA ATGCTTCTCG TTTTGGTGTG AAGGGTAATT TCGAACTGTC TAGCTCGCTG GAAGCCTTCT ACACAGTTGA ATACGAAGTT GATACAGGTG CTGCGACTAG CGACAACTTT AAAGCACGTA ACCAATTTGT TGGCCTAAAA GGCGCATTCG GTTCGTTCTC AGTTGGCCGT AACGACACGC TGTTAAAAAT CTCTCAAGGT AACGTTGATC AATTTAACGA TTTATCTGGC GACTTAAAAA GCCTGTTCAA AGGCGACAAC CGTTTAGGTC AAACTGCGAC TTACTTATCT CCATCAATCA GCGGTTTCGT ATTCGGTGCT ACTTATGCTG CTGAAGGTGA TGCTGACCAA CAAGGTCAAG ACGGTTTCAG CTTAGCCGCT ATGTACGGTG ACGCTAAACT GAAAAAATCA CCTATCTATG CTGCTATTGC TTATGACTCA GATGTAAAAG GTTATGAAAT CCTACGTGCA TCGGTTCAAG GTAAAATCGC TAATTTAACC TTAGGTGGTA TGTACCAACA ACAGGAAGAG ACGTATAAAA ATGCTCTACC TGTAACGACT GATAGTGTTA ACGGTTACCT GTTCAGCGCT GCCTATGATA TCGATGCTGT TACTTTGAAA GCACAATATC AAGATATGGA AGACAAAGGT GATTCATGGT CAGTAGGTGC TGATTATGCA CTGGCTAAAC CGACTAAAGT CTTCGCTTTC TACACCAATC GTTCGTTAGA AGCGTCTGCT GATGATGACA AATACATCGG TGTTGGATTG GAACACAAAT TCTAA
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Protein sequence | MMNVFCKTLL ASALASATLA SAYAAEPLTV YGKLNVTAQS NDEKGDATTT IQSNASRFGV KGNFELSSSL EAFYTVEYEV DTGAATSDNF KARNQFVGLK GAFGSFSVGR NDTLLKISQG NVDQFNDLSG DLKSLFKGDN RLGQTATYLS PSISGFVFGA TYAAEGDADQ QGQDGFSLAA MYGDAKLKKS PIYAAIAYDS DVKGYEILRA SVQGKIANLT LGGMYQQQEE TYKNALPVTT DSVNGYLFSA AYDIDAVTLK AQYQDMEDKG DSWSVGADYA LAKPTKVFAF YTNRSLEASA DDDKYIGVGL EHKF
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