| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1378 |
|---|
| Symbol | ppnK |
|---|
| ID | 5753107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 1652069 |
|---|
| End bp | 1652998 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641287648 |
|---|
| Product | inorganic polyphosphate/ATP-NAD kinase |
|---|
| Protein accession | YP_001553812 |
|---|
| Protein GI | 160874496 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0061] Predicted sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000100687 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.288093 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGATCA ATTTTGACGT TTCAAGGCCT AAGGCCAGAT CTAGCATAAA TATGATCACA
AAGTTTCATA CTATCGGCCT TATCGGCAAA CCTCATCACC AAGGGACCAA CCAAACCTTA
AAACGTCTGC ATCATTGGCT GACAATGCAA GGCTTTGAAG TCTTAGTGGA AGAGCGTGTT
GCTGCCGAAT TAGGGCCCAA TATCGAGGCG GTCGATTTAC TAGAAATTGG CGCGCGCTGC
GACTTAGCCA TAGTCGTCGG GGGTGACGGT AACATGCTTG GTGCTGCTAG GGTATTAGCC
CGCTTCGATT TAGGCGTGAT TGGCGTTAAC CGCGGCAATT TGGGCTTCTT AACCGACCTG
CCGCCCGATG CCTTTGAAGA AGCACTCGCC AAAGTCCTCG ACGGTGAGTT TGATACCGAG
CACAGATTCT TACTCGAAGC CGAAGTCTAT CGCCACGGTA TGCTCAAGGC GAGCAATACC
GCCGTCAACG AAGCCGTACT CCATCCGGGT AAAATTGCCC ACATGATTGA GTTTGAGGTC
TATATTGACG ATCAGTTCAT GTACAGCCAG CGTGCCGACG GCATGATAGT GTCAACGCCA
ACCGGTTCGA CGGCTTATGC CCTCTCCGCT GGCGGAGCTA TCCTGACGCC TAATCTGCAG
GCCCTGATCT TAGTGCCTAT GTTCCCGCAC ACTTTGTCGT GCCGCCCGAT TGTCGTCGAT
GCCTGCAGCA CCATTAAAAT GGTGGTGTCA CCGGACAATG GCGAGAACCT CGAAGTCAGC
TGTGATGGCC ACGTGCATTT AGCCGTGTTA CCGGGCGATG AAATCATAGT GCGCCGCAGC
TCAGAACGGT TACGTTTGAT CCATCCAAAA GGGCACAATT ATTTCCACGT GCTACGGACC
AAATTAGGCT GGGGCAGCAA GTTGTTTTAA
|
|---|
| Protein sequence | MGINFDVSRP KARSSINMIT KFHTIGLIGK PHHQGTNQTL KRLHHWLTMQ GFEVLVEERV
AAELGPNIEA VDLLEIGARC DLAIVVGGDG NMLGAARVLA RFDLGVIGVN RGNLGFLTDL
PPDAFEEALA KVLDGEFDTE HRFLLEAEVY RHGMLKASNT AVNEAVLHPG KIAHMIEFEV
YIDDQFMYSQ RADGMIVSTP TGSTAYALSA GGAILTPNLQ ALILVPMFPH TLSCRPIVVD
ACSTIKMVVS PDNGENLEVS CDGHVHLAVL PGDEIIVRRS SERLRLIHPK GHNYFHVLRT
KLGWGSKLF
|
|---|
| |