| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1357 |
|---|
| Symbol | |
|---|
| ID | 5753086 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 1616721 |
|---|
| End bp | 1618952 |
|---|
| Gene Length | 2232 bp |
|---|
| Protein Length | 743 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641287628 |
|---|
| Product | glycogen branching enzyme |
|---|
| Protein accession | YP_001553792 |
|---|
| Protein GI | 160874476 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
|---|
| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.513069 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGACTC AAGCCAATGC CTATTTCTAC GATGGCGCCG ACGTCGCCCT ACTTAATGGT
CAATACACTG ATGTTTTTTC GCTTTTGGGT ATGCACAGTG CCAACGAGGG TAAGGCATTA
ATTGTTCGTT GTTTTTTACG CAATGCCCTC AGTGTGGATG TGATCAGCAT TAAAGATGGC
CGTAAAGTAG CGAGTCTGGA CAAAGTCAAC GAGCAGGGAC TGTTCGCCGG TACTCTGGGG
CGACGCGTCA AACCGTTTCT CTATTTGCTG CGGGTAGAAT ATCCCCTGTG TCAGTTAGAT
ATAGTCGACC CTTATCAGTT TGATTCATTG CTTAATAGTG ACGATATTTA CCTGTTTGGT
GAAGGCAGCG CCGAGCGCGC CTATGAGTTT TTAGGCGCCA ACTGGCGTCA GACCCAAGGC
GTTGAAGGTG TGCATTTTTG TGTGTGGGCA CCCAATGCCA AAAGGGTCTC TGTGGTGGGG
GATTTCAACC ATTGGGACGA TACTCGCCAT GTAATGCGCC AACATCTTGC CAATGGTTTG
TGGGAGCTAT TTCTGCCTAA TGTGGTTGAA GGCGCCCACT ATAAGTTTGA TTTGGTTTAT
CAAAATGGTG AGCGTCATAC CAAGTCCGAC CCCATGGCGA CTCAAATGGA ATGCGCGCCC
CATAATGCTT CTATCGTGCC CCCAAAAGCC CATCACAGTT GGAATGATAC CGCTTGGATG
AGTAAACGCG CGGCGACTGC TTGGCATAAA GCGCCCATGT CGGCCTACGA AGTGCACTTA
GGTTCGTGGC GTCGTAAGGG AGAGCAAGGC GAGCAATATC TTGATTATCA AGACTTGATT
GAACAGCTTA TTCCCTATGT GAAGGAGCAA GGTTTTACCC ACATTGAACT GATGCCGATC
AGCGAGTTTC CCTTCGATGG TTCGTGGGGA TATCAGCCTG TGGGTCTCTA TGCACCGACC
CACAGATTTG GCGATGCCAA TGGGTTAAAA GCCTTTGTGG ATGCCTGCCA TCAGGCGGGA
ATTGGTATCA TCCTCGATTG GGTGTCGGCA CATTTTCCTA AGGATCCCCA CGGCTTAGTG
CGTTTCGATG GCACTTGTTT GTATGAGCAT GAAGATCCTC GCAAGGGCAC ACATCCCGAT
TGGGATACCT TGATTTATAA CTATGATCGC GGTGAAGTGC GCAGTTTCTT GTTGAGTAAT
GCCTGTTACT GGCTGCGGGA GTTCCACTTT GATGGCCTGC GTCTCGATGC CGTGTCTTCT
ATGTTGTACC TCGATTACAG CCGCGAGCCG GGCCAATGGC TGCCTAATGC CTATGGTGGA
CGGGAGAATC TCGAAGCCAT TAGTTTCTTA CAAATTTTGA ATCAACGCCT ATACCAAGCT
TTCCCCGGCA TTTGCATGAT CGCCGAAGAG TCCACCGCCT TTGCGGGGGT GACTAAACCG
ACGGATCAGC AAGGTCTCGG CTTTGGCTTT AAATGGAACA TGGGCTGGAT GAATGACAGC
TTAAGCTACT TAGGCCGAGA TCCGCTTTAC CGCCAATTCC ACCATCATCA ATTGACCTTC
AGTTTGATGT ACGCCTATAC CGAGCAATTT ATGTTGTCAG TGAGTCACGA TGAAGTGGTC
CACGGCAAGG GCTCGTTGCT GCATAAAATT CCCGGTGACG ATTGGCAGAA ATTTGCGACC
CTGCGTGCTT ATTACGGTTT TATGTGGGGG CATCCCGGTA AGAAATTACT CTTTATGGGC
TGCGAGTTTG GTCAGCGAAA TGAGTGGAAC CATAACCAGA GTTTAGATTG GCACTTATTG
GCTTATGAAC CGCACCAAGG TGTGCAACGT TGGCTTAAAG ATCTCAATCA ATTATATCAA
GACATGCCTG CTTTATCAGT TCAGGATTAC GAGGGGGCAG GATTCAGTTG GCTAGATTGT
GAAAATAGCC GCGATAGCAT CTTTACCTTT GTGCGTTACG GCTTAGCGGG TGATGCGCCG
TTAGTGTTTG TCATCAACAT GACGCCCCAA TTGCACACTG GGTTCCGTAT TGGTTTGCCC
TTGGCGGGGG ATTACCGCGA ATACCTGAAT AGCGATAGCC AGATTTATGG TGGCAGTAAC
CAAGGTAATG CGGGCACTGT CGTTGCTGAG TCGCTGCCGT GGCAGGGCAT GGCGCAGAGC
GCGCTGATCA CTGTGCCGCC CTTGGGTTGT CTAGTGATTG GGCCTGCAAC TGGATTGGCT
GAGGCGAACT AG
|
|---|
| Protein sequence | MMTQANAYFY DGADVALLNG QYTDVFSLLG MHSANEGKAL IVRCFLRNAL SVDVISIKDG
RKVASLDKVN EQGLFAGTLG RRVKPFLYLL RVEYPLCQLD IVDPYQFDSL LNSDDIYLFG
EGSAERAYEF LGANWRQTQG VEGVHFCVWA PNAKRVSVVG DFNHWDDTRH VMRQHLANGL
WELFLPNVVE GAHYKFDLVY QNGERHTKSD PMATQMECAP HNASIVPPKA HHSWNDTAWM
SKRAATAWHK APMSAYEVHL GSWRRKGEQG EQYLDYQDLI EQLIPYVKEQ GFTHIELMPI
SEFPFDGSWG YQPVGLYAPT HRFGDANGLK AFVDACHQAG IGIILDWVSA HFPKDPHGLV
RFDGTCLYEH EDPRKGTHPD WDTLIYNYDR GEVRSFLLSN ACYWLREFHF DGLRLDAVSS
MLYLDYSREP GQWLPNAYGG RENLEAISFL QILNQRLYQA FPGICMIAEE STAFAGVTKP
TDQQGLGFGF KWNMGWMNDS LSYLGRDPLY RQFHHHQLTF SLMYAYTEQF MLSVSHDEVV
HGKGSLLHKI PGDDWQKFAT LRAYYGFMWG HPGKKLLFMG CEFGQRNEWN HNQSLDWHLL
AYEPHQGVQR WLKDLNQLYQ DMPALSVQDY EGAGFSWLDC ENSRDSIFTF VRYGLAGDAP
LVFVINMTPQ LHTGFRIGLP LAGDYREYLN SDSQIYGGSN QGNAGTVVAE SLPWQGMAQS
ALITVPPLGC LVIGPATGLA EAN
|
|---|
| |