Gene Sbal195_1328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_1328 
Symbol 
ID5753056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp1577847 
End bp1580264 
Gene Length2418 bp 
Protein Length805 aa 
Translation table11 
GC content49% 
IMG OID641287598 
Productpeptidase S16 lon domain-containing protein 
Protein accessionYP_001553763 
Protein GI160874447 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1067] Predicted ATP-dependent protease 
TIGRFAM ID[TIGR00764] lon-related putative ATP-dependent protease 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.047879 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACTG ACGTCGTATC AAGCCAAGCC ACCCTACTCG ACAGTAAACA ACTGTATCGC 
ATTTGCGAAC TCGACCAATT AAGCACAGAT TGCCAGTCCA CAGCCGAGCT CACCCCACTT
GATGATATTG TCGGCCAAGA ACGTGCCCAG CAAGCGGTAG AGTTTGCGAT GGGGATTAAA
GAAAAGGGCT ATAACATTTA TGCCATCGGC CAGAACGGCC TTGGCAAACG CACTATGATG
CTGCGCTATT TAAGCCGTCA CGAGCCAAGC GATCATACGC TGTACGACTG GTGTTACGTG
GTTAATTTCG ATGATACCCG TTGCCCTAAA GTGCTCAAAC TGAGCGCGGG TACTGGGCTC
GAATTTAAAA AAGCCGTCGA AAAATTAATG CTAAAACTTG TCAAAGCTTT GCCTTTAGCC
TTTGATAATG AAATGTATTA TGCCCGCACA GAAAAGCTCA AAAGCCAGCT ATCACAGAAA
CAAGAAGTCG CACTCACAGA ATTAACCGAA GAAGCAAAAC AAAAAGGCAT CAGCCTCAGC
TTGACTATGC AGGGCGACTA TCAAATGTTA GCCCTCAATG GTGAAGAGCC CCACGACGAA
GCCTCATTCG AAGCCTTGAC CGATGCTGAG CGCAGCCAAT TTGAAAGCAA TATCAATGGC
CTAGAAGTGA AGCTGCGCGG AATTATTCGC CAAATCACAG AATGGGAAGA AGAATTTAGC
GACAAGCAGC AAGAGCATGA CGAGCAAGTC GCCAAAGAAG TGTTAATCCA TTTTATTAAG
CCACTTAAAG ATAAGTTCAA GCACCAGCCA GAAGCGCGCA CTTTCTTAAC CGGTATGCAG
GCGGATATCT TAGATAATCT GGATATTTTC TTAGAAGAAA GCGAGGAACA ATTGGGCCTA
GCCTATGCTT CCCTAGAAAA GAAAATGCCC CGCCGCTACC AAGTTAACGT TTTGGTCGGC
CAAGGCACTC AAAAATTCCC CATAGTCGTC GAAGAAAGCC CGAGTTATCA CAGCCTATTT
GGCTATGTGG AGAACGCCAC ATTTAGAGGC ACAGTGTTCA CCGACTTCTC GCTTATCCGG
CCCGGCAGCC TGCACAAGGC GAATGGCGGC GTGTTATTGA TGGATGCCGT TAAAGTATTA
GAGCGCCCTT ACGTGTGGGA CGGACTAAAG CGCGCCCTGC GTTCACGAAA ACTGGATTTA
AGCTCACTCG AACGGGAAGT GTCTCTATCG GGTACGATTT CCTTGGCGCC CGAGCCTATC
CCCTTAGATG TGAAAATCAT CCTGTTTGGC GATCATGAAA CCTATCAGCT GCTGCAGCAC
TATGATCCTG ACTTTAGCGA GCTATTTCGC GTTACCGCCG ATTTTGAAGA TGTGATGGAC
AGAACCGCCG CCTCTGAGGC GCACTATGCC CGCTTTATTT CGAGCATTGT CCACGACAAC
AATATGCTGC ACTGCGATCG CGCCGCCATA GCGCGCATCA TTGAATACAG CTCGCGGGAA
GCCGAAGATC AGCAAAAACT GTCGCTACAC TCGGCCAATA TTGCCAACCT GCTGCGGGAA
TCAAACTACT GCGCTAAATC GGCAGGCAGT CAGCAAATTT TAGTGCCGCA CGTTGAGCAA
GCACTGCGAA ATCAAGAACA AAGAGTCTCG CGTCTGCACG ATAACATAAT GCAGAGCTTT
ACCAACGGCA CCACCTTGAT CAGTACTCAG GGCAAAGTGG TTGGGCAAAT CAATGCCTTA
TCCGTCATCT CGACCTCTGA TCATCAGTTT GGTATGCCCA ATCGCATCAC AGCAACCACT
GCCTTTGGTA AAGGTGAAGT GATGGATATC GAACACAGAG TCAAACTAGG GGGGCGAATT
CACTCTAAGG GCGTGTTGAT CTTAACCGCT TATTTAGCCT CAGTGTTAGG TAAAACAGCG
CAAATCCCGC TCACCACTTA CCTCACCTTC GAGCAATCTT ACAGCGGCGT GGACGGCGAT
AGCGCCTCAA TGGCCGAATG TTGCGCCATT ATCTCGGCCA TTAGCGAGCA AGCACTAAGG
CAAGATATTG CCATCACAGG TTCGATGAAC CAGTTTGGTG AGGCTCAGCC CATTGGCGGT
GTGAATGAGA AAATTGAAGG CTTCTTTGAT GTCTGCAAAA TTAAAGGCCG TACGTCAGAT
CAAGGGGTGA TTATTCCCGC TTCGAACATG GCTAACCTTA TGCTACGTAA AGACATTGTC
GAGGCAGTGG CGCAAGGTGA GTTCCACATT TGGGCCATTT CCCATGTGAC TCAAGCCATG
GAGTTGCTGC TTGGTAAAAC CGCAGGCAGT TTGTCGCAAA CGGCCACGCC TAGCCAAGGG
CAATATTCTC CCGAGAGCAT TTTCGGCATT GCCCAGCAAA AGCTCACCGC ACTTAGATCC
TTAGTTAAAG CGGATTAA
 
Protein sequence
MPTDVVSSQA TLLDSKQLYR ICELDQLSTD CQSTAELTPL DDIVGQERAQ QAVEFAMGIK 
EKGYNIYAIG QNGLGKRTMM LRYLSRHEPS DHTLYDWCYV VNFDDTRCPK VLKLSAGTGL
EFKKAVEKLM LKLVKALPLA FDNEMYYART EKLKSQLSQK QEVALTELTE EAKQKGISLS
LTMQGDYQML ALNGEEPHDE ASFEALTDAE RSQFESNING LEVKLRGIIR QITEWEEEFS
DKQQEHDEQV AKEVLIHFIK PLKDKFKHQP EARTFLTGMQ ADILDNLDIF LEESEEQLGL
AYASLEKKMP RRYQVNVLVG QGTQKFPIVV EESPSYHSLF GYVENATFRG TVFTDFSLIR
PGSLHKANGG VLLMDAVKVL ERPYVWDGLK RALRSRKLDL SSLEREVSLS GTISLAPEPI
PLDVKIILFG DHETYQLLQH YDPDFSELFR VTADFEDVMD RTAASEAHYA RFISSIVHDN
NMLHCDRAAI ARIIEYSSRE AEDQQKLSLH SANIANLLRE SNYCAKSAGS QQILVPHVEQ
ALRNQEQRVS RLHDNIMQSF TNGTTLISTQ GKVVGQINAL SVISTSDHQF GMPNRITATT
AFGKGEVMDI EHRVKLGGRI HSKGVLILTA YLASVLGKTA QIPLTTYLTF EQSYSGVDGD
SASMAECCAI ISAISEQALR QDIAITGSMN QFGEAQPIGG VNEKIEGFFD VCKIKGRTSD
QGVIIPASNM ANLMLRKDIV EAVAQGEFHI WAISHVTQAM ELLLGKTAGS LSQTATPSQG
QYSPESIFGI AQQKLTALRS LVKAD