| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1319 |
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| Symbol | |
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| ID | 5753047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 1568031 |
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| End bp | 1568681 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641287589 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001553754 |
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| Protein GI | 160874438 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0542522 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000972679 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGATACGC AAAACAACAT CATCAGTGTC GGCTTAGTAG AAGATCAACA ATTGGTTCGC
CAAGGTATCG CTAGCCTGCT CGCCATTTCC GACAACATTC GCGTGTTGTG GCAGGCTGAA
GACGGCCAAG ACGCACTCAG CCAACTCGAC AATAATCCTG TCGATGTGCT GCTCAGCGAT
ATTCGCATGC CAAATCTTGA TGGCATCGCC ATGCTCAAAC AGATACGTCA GAGTGCCAAT
AGCTTACCTG TCATCATGTT AACCACCTTC GATGACAGTG AGTTATTCCT CAATAGTTTG
CAGGCGGGAG CCAACGGCTT TTTGCTCAAG GACGTGTCAC TCGATAAGTT ACTGCACGCC
ATCGAAACCG TCGCCAAAGG CGGCTACTTG ATTGAACCTT CGGTACTCAA ACAGATGAGT
GAGCCTAAAC CTGCACCTAG CGTTGGGGAA ACTAGAAATG AATTATTGTC GGAACGGGAG
CGGGAAATTC TCAGTTTTAT GGCGGGCGGC TTCTCCAACA AGGAAATCGC CAATGCAGTA
TTTTTAGCCG AGGGCACAGT GAAAAATCAT GTCTCTAACA TACTCACTAA ACTCGATTGC
CGAGACCGCA CCCAAGCGGT ACTCAAGGGC TTACAACTGG CGTTGATTTA A
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| Protein sequence | MDTQNNIISV GLVEDQQLVR QGIASLLAIS DNIRVLWQAE DGQDALSQLD NNPVDVLLSD
IRMPNLDGIA MLKQIRQSAN SLPVIMLTTF DDSELFLNSL QAGANGFLLK DVSLDKLLHA
IETVAKGGYL IEPSVLKQMS EPKPAPSVGE TRNELLSERE REILSFMAGG FSNKEIANAV
FLAEGTVKNH VSNILTKLDC RDRTQAVLKG LQLALI
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