| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1304 |
|---|
| Symbol | thrA |
|---|
| ID | 5753032 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 1543486 |
|---|
| End bp | 1545954 |
|---|
| Gene Length | 2469 bp |
|---|
| Protein Length | 822 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641287574 |
|---|
| Product | bifunctional aspartokinase I/homeserine dehydrogenase I |
|---|
| Protein accession | YP_001553739 |
|---|
| Protein GI | 160874423 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0460] Homoserine dehydrogenase
[COG0527] Aspartokinases |
|---|
| TIGRFAM ID | [TIGR00657] aspartate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.581761 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTAA TGAAATTTGG TGGTACCTCG CTTGCAAATT GGCAGCGATT CTCGATGGCA
GCGGATATCG TTGCTCAGTC ATCTAAGCTT GAACCCATAG CCACTGTGCT ATCGGCCCCT
GCAACTGTGA CGAATGCTTT ATTAGAAATG GTCGACGTAG CCGTTAAAGG TGAAGATTAT
TTACCTGTGC TGCAGCACGT TGAGCGGGTA TTTACTTCGC TGTACCAAGA CGCCGTTAAC
TCAGTGTTGT CGAGTGAGCA AAGCGAACAG CTTTTTTCTG GACTTAATGC CCAGCTGGTG
ATCTGGCAGG ATAGATTACG TGGTATCGGA TTACTGCAAG AATGTCCCGA TGGTATCCGC
GCCGAAATCG TGGTTGCAGG TGAGCGTTTA TCTGCAGCCT TGATGGAACA AGTGATGATT
TCTAAGGGGA TCACTTCGGC TCAGCTCGAC CCACGCGCCT TATTTTTAGG TCGTGGTCGT
CCGTTAGAAT CTGTCGTTGA TATCGCTGTG AGTAAGCCAA GGTTTCGCGC GTTGGCGCTA
GGTGAAAAAC GCGTATGGGT GATGCCGGGA TTCACCGCCG CCGATGAACA GGGCAAAGTG
GTGACGTTAG GCCGTAATGG TTCTGACTAT TCTGCTGCCG TGCTCGCCGC CTGTTTGGAT
GCTTCGAGCT GCGAAATCTG GACCGATGTT GACGGTGTTT ATAATACCGA CCCACGTGTG
GTTGCCGATG CTAAGTTGTT GTCACAACTG AGCTATCAAG AGGCAATGGA GCTCTCCTAT
TTTGGTGCTA AGGTGTTGCA TCCTAAGACT ATTGCACCTA TCGCCCAGTT CCATATTCCC
TGTTATATCA AAAACAGTTT TAACCCTGAT GCGCCCGGTA CTCTGGTATC AAACCAAGCC
GATGAAACTG GCTTACAGGT TAAAGCTATC TCCAATTTAG ATAACCAGAC CATGTTCGAT
ATTTCAGGCC CAGGCATGAA AGGTATGGTT GGCATGGCGA GCCGTACTTT AGCGGCGATT
TCCCGCAGCG GCGTGTCTGT GTCTTTAATC ACCCAAAGTT CTTCTGAATA CAGCATTAGC
TTCTGTGTGG CCACATCTGA TTCGGCCAAA GTGAAATGGG CTTTAGAGCA AGAGTTTGAA
TTAGAAATAA AAAGTGATTT GCTTGAGCCT ATCGCTATGC GCCATGAGCT GGCCATTGTG
TCCTTGATTG GTGATGGAAT GCGCACCCAC AAAGGGGTTG CGGCGCGTTT CTTCCAAGCG
TTAGCGCAGG CTAGTGTGAA CATTATCGCC ATCGCCCAAG GTTCGTCCGA GCGCTCGATT
TCGACTGTGA TCGAGCAGCG TAAGACTAAG CATGCGGTGG CGGCGTGTCA TCAAGGCTTT
TTCGATGTGC AGCAATATTT AGATGTGTTT TTAGTGGGAT GCGGCAACGT GGGTGCTGGT
CTGCTCGAGC AGATAAAACA ACAGTCCGCC ATGCTCAAAG AGCAGCACAT CAGTATCCGT
GTTTGCGGCA TAGTGAATTC GAACAAGATG TTACTCGACA GTGCGGGCAT CGATTTAAGC
AACTGGTCTA GCTTGCTTGC CGATAGTCAG CAAGCTTGTG ATATCCCAGC GTTACTCGCA
TGGGCGAAAG AGCAACAATT ACTAAACCCT GTGCTGGTGG ATTGTACTTC GAGCGAGCAA
GTGTCGGATC TGTATTTGGA TGTGATGAAC TCAGGTTTGC ATGTGGTCAC GCCGAACAAA
AAGTCGAACA CTCGCGATTA TGCTTATTAC CAAGCACTTC GCCAAACAGC CTTAAAACAG
CGTCGCCAAT TTTTATACGA AACCACAGTC GGCGCGGGTT TACCTGTTAT CGATAACCTG
AAAAAACTAT TATTTGCGGG CGATAAGCTG CATAAGTTTA ACGGTATTTT ATCGGGCTCT
TTATCCTTTA TCTTCGGCAT GCTCGATGAA GGCATGACTC TTTCTGAAGC GACTGGTCTG
GCGCGGGAAA AATGTTTTAC TGAGCCCGAT CCCCGTGATG ATTTGAGTGG TATGGATGTG
GCGCGTAAGG TGCTCATTCT TGCCCGTGAA GTGGGACTAA AGCTAGAACT CAGTGACGTG
CAGGTTGAAT CTGTATTGCC AGCGGAGTTT GATGATTCAG GCGATGTTGA GAGCTTTATG
GCGCGTTTGC CGCAGGTTGA TGCGGCGATT GCCGCTAAAG TGGCGCAGGC CAAAGCCCAA
AGTAAAGTGC TGCGTTATGT GGGACAAATT GAAGACGGTG TGTGCCGAGT GCGTATCGCC
GAAGTCGATG CACAGGATCC CCTTTATAGT GTTAAAGGCG GTGAAAATGC CTTGGCATTC
TACAGCCGTT ATTATCAGCC CATTCCGTTT GTGCTGCGCG GTTATGGCGC GGGAACGGAA
GTGACTGCCG CTGGCGCTTT TGCCGATGTA TTAAGAACCT TGAATTGGAC TCGTGAGGTG
AGTGTATGA
|
|---|
| Protein sequence | MKVMKFGGTS LANWQRFSMA ADIVAQSSKL EPIATVLSAP ATVTNALLEM VDVAVKGEDY
LPVLQHVERV FTSLYQDAVN SVLSSEQSEQ LFSGLNAQLV IWQDRLRGIG LLQECPDGIR
AEIVVAGERL SAALMEQVMI SKGITSAQLD PRALFLGRGR PLESVVDIAV SKPRFRALAL
GEKRVWVMPG FTAADEQGKV VTLGRNGSDY SAAVLAACLD ASSCEIWTDV DGVYNTDPRV
VADAKLLSQL SYQEAMELSY FGAKVLHPKT IAPIAQFHIP CYIKNSFNPD APGTLVSNQA
DETGLQVKAI SNLDNQTMFD ISGPGMKGMV GMASRTLAAI SRSGVSVSLI TQSSSEYSIS
FCVATSDSAK VKWALEQEFE LEIKSDLLEP IAMRHELAIV SLIGDGMRTH KGVAARFFQA
LAQASVNIIA IAQGSSERSI STVIEQRKTK HAVAACHQGF FDVQQYLDVF LVGCGNVGAG
LLEQIKQQSA MLKEQHISIR VCGIVNSNKM LLDSAGIDLS NWSSLLADSQ QACDIPALLA
WAKEQQLLNP VLVDCTSSEQ VSDLYLDVMN SGLHVVTPNK KSNTRDYAYY QALRQTALKQ
RRQFLYETTV GAGLPVIDNL KKLLFAGDKL HKFNGILSGS LSFIFGMLDE GMTLSEATGL
AREKCFTEPD PRDDLSGMDV ARKVLILARE VGLKLELSDV QVESVLPAEF DDSGDVESFM
ARLPQVDAAI AAKVAQAKAQ SKVLRYVGQI EDGVCRVRIA EVDAQDPLYS VKGGENALAF
YSRYYQPIPF VLRGYGAGTE VTAAGAFADV LRTLNWTREV SV
|
|---|
| |