Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1278 |
Symbol | rnc |
ID | 5753006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 1517182 |
End bp | 1517862 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641287548 |
Product | ribonuclease III |
Protein accession | YP_001553713 |
Protein GI | 160874397 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.251882 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACCGA TTAAAAATTT GCCACGTTTG TGTCGTACTT TAAGTTATGA GTTCAAGAAT ATTGAGCTGT TGACTCAAGC GCTGACCCAC AGAAGTGCGG CAAATAAACA CAATGAACGC TTAGAGTTTT TAGGTGATTC AATTTTATCT ATTGTGATTT CTGATGCCTT ATATCATCAG TTTCCGAAGG CGACCGAAGG CGATTTAAGC CGGATGCGCG CTACCTTAGT GCGCGGTGAT ACCTTAACGA TCATCGCCCA AGAATTTAAG CTCGGCGATT ATTTATATCT TGGTCCTGGT GAATTAAAAA GTGGCGGATT TAGACGCGAG TCGATTCTTG CCGATGCGGT TGAAGCCATT ATTGGCGCCG TTTATCTTGA TTCCGATCTC GAAGTTTGCC GTGCATTACT GCTGAAATGG TATGCCGAGC GTTTGGCCGA AATCCAACCC GGGATCAGCC AGAAAGACGC GAAAACCTTA CTGCAAGAAC ATTTACAAGG GTTTAAAAAG CCACTGCCTG ATTACCAAGT AATCAACATA GAAGGCGATG CCCACGATCA GACATTTACC GTTGAATGTC GTATTGAAGA CTTGAGCCAA AGCGTCATTG GTGTGGCGAG TTCACGCCGT AAAGCCGAGC AAATCGCGGC CGCTCAAGTA TTGGAGTTAC TAAAGAAATG A
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Protein sequence | MEPIKNLPRL CRTLSYEFKN IELLTQALTH RSAANKHNER LEFLGDSILS IVISDALYHQ FPKATEGDLS RMRATLVRGD TLTIIAQEFK LGDYLYLGPG ELKSGGFRRE SILADAVEAI IGAVYLDSDL EVCRALLLKW YAERLAEIQP GISQKDAKTL LQEHLQGFKK PLPDYQVINI EGDAHDQTFT VECRIEDLSQ SVIGVASSRR KAEQIAAAQV LELLKK
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