Gene Sbal195_1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_1278 
Symbolrnc 
ID5753006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp1517182 
End bp1517862 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content45% 
IMG OID641287548 
Productribonuclease III 
Protein accessionYP_001553713 
Protein GI160874397 
COG category[K] Transcription 
COG ID[COG0571] dsRNA-specific ribonuclease 
TIGRFAM ID[TIGR02191] ribonuclease III, bacterial 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.251882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCGA TTAAAAATTT GCCACGTTTG TGTCGTACTT TAAGTTATGA GTTCAAGAAT 
ATTGAGCTGT TGACTCAAGC GCTGACCCAC AGAAGTGCGG CAAATAAACA CAATGAACGC
TTAGAGTTTT TAGGTGATTC AATTTTATCT ATTGTGATTT CTGATGCCTT ATATCATCAG
TTTCCGAAGG CGACCGAAGG CGATTTAAGC CGGATGCGCG CTACCTTAGT GCGCGGTGAT
ACCTTAACGA TCATCGCCCA AGAATTTAAG CTCGGCGATT ATTTATATCT TGGTCCTGGT
GAATTAAAAA GTGGCGGATT TAGACGCGAG TCGATTCTTG CCGATGCGGT TGAAGCCATT
ATTGGCGCCG TTTATCTTGA TTCCGATCTC GAAGTTTGCC GTGCATTACT GCTGAAATGG
TATGCCGAGC GTTTGGCCGA AATCCAACCC GGGATCAGCC AGAAAGACGC GAAAACCTTA
CTGCAAGAAC ATTTACAAGG GTTTAAAAAG CCACTGCCTG ATTACCAAGT AATCAACATA
GAAGGCGATG CCCACGATCA GACATTTACC GTTGAATGTC GTATTGAAGA CTTGAGCCAA
AGCGTCATTG GTGTGGCGAG TTCACGCCGT AAAGCCGAGC AAATCGCGGC CGCTCAAGTA
TTGGAGTTAC TAAAGAAATG A
 
Protein sequence
MEPIKNLPRL CRTLSYEFKN IELLTQALTH RSAANKHNER LEFLGDSILS IVISDALYHQ 
FPKATEGDLS RMRATLVRGD TLTIIAQEFK LGDYLYLGPG ELKSGGFRRE SILADAVEAI
IGAVYLDSDL EVCRALLLKW YAERLAEIQP GISQKDAKTL LQEHLQGFKK PLPDYQVINI
EGDAHDQTFT VECRIEDLSQ SVIGVASSRR KAEQIAAAQV LELLKK