Gene Sbal195_1217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_1217 
Symbol 
ID5752944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp1448137 
End bp1449432 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content46% 
IMG OID641287486 
Productglucose/galactose transporter 
Protein accessionYP_001553652 
Protein GI160874336 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID[TIGR01272] glucose/galactose transporter 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00556902 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.207324 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATTG CAAATGAAAC TGAGGCGAGT GCAGTGAGTG AGGCGGCAAC GAGTGTGCAC 
CAGAGTGGCA ACTTTAGGTT CGCTTTAGTG GCATTAACAT CGTTGTTTTT CATGTGGGGA
TTCATTACTT GTCTTAACGA TATCTTGATA CCTTATTTAA AAAACATGTT TGAGCTGAAT
TACGCCCAAG CCATGTTAGT GCAGTTTTGT TTTTTTGGGG CTTACTTTAT TGTCTCAATC
CCAGCGGGTG CACTTGTGGG TAAGATTGGT TATCAAAAAG GCATAGTCAC TGGGCTTGGT
ATTGCGTGTT TAGGCTGCTT ATTATTCTAT CCTTCGGCGA GTTTCGCCTC CTATTGGATG
TTCCTAGGCG CTTTTTTTGT TTTAGCCTCT GGCATTACCA TTCTGCAAGT GGCGGCTAAT
CCCTACGTCA GCGTGCTGGG ACCTGCTAAA ACCGCGTCAT CGAGACTCAC TCTGACCCAA
GCGTTTAATT CCTTTGGCAC CACAGTTGCT CCGTTTTTTG GTAGTTGGTT GATTTTATCG
ACTTCACATC AAATGACGGG AGAGGCTGCT CCTGACCTTG TAGTCAGCGC TGCGGCTCAA
GCGAGCACAG TACAAGTTCC CTATTTGATT TTAGCGGCCA GTTTATTTGT GCTGGCGGTG
ATTTTTATAC TATTAAAGCT GCCTTTTTTA GGTCAAAAAC TGCCTGCGAG CAGTGCTAAA
GTGCTGGGCA GTGCATGGCA ATTTCCGCAT CTTGTTCTCG GTAGCGTGGG GATTTTTGTG
TATGTGGGGG CCGAAGTCGC CATTGGCAGT TTTTTGATTA GCTTTTTAGT TCAGCCCGAT
ATTGGCGGTT ACACCCATGC TGAAGCCGCG CATTACATTG CCTATTATTT TGGTGGCGCT
ATGGTTGGGC GCTTTATCGG CGCGGCTGTG ATGCAAAAAA TCAAGGCCGG CAAAGTGTTA
GCCTTTAATG CGATTTGTGC TTGCTTGCTG GTGGCCTTAG CCATATTTAG TGCGGGGGCG
ATGGCGATGT GGGCCTTACT GTTAGTTGGG TTATGTAACT CTATTATGTT CCCGACCATT
TTCAGCTTGG CATTACAAGA TCTTGAACAA CACACCAGCC AAGGTTCTGG CATTTTATGT
TTGGCGATTG TGGGCGGCGC GATTGTGCCC TTATTTCAAG GTATGTTAGC CGATCATTTT
GGTATCCAAT TGGCCTTTCT CTTACCGCTG CTTTGTTATG GTTTTATCGC CTATTACGGG
GCTAAGGGTT GTGATGCCCC AAGACCAAGA TTTTAA
 
Protein sequence
MAIANETEAS AVSEAATSVH QSGNFRFALV ALTSLFFMWG FITCLNDILI PYLKNMFELN 
YAQAMLVQFC FFGAYFIVSI PAGALVGKIG YQKGIVTGLG IACLGCLLFY PSASFASYWM
FLGAFFVLAS GITILQVAAN PYVSVLGPAK TASSRLTLTQ AFNSFGTTVA PFFGSWLILS
TSHQMTGEAA PDLVVSAAAQ ASTVQVPYLI LAASLFVLAV IFILLKLPFL GQKLPASSAK
VLGSAWQFPH LVLGSVGIFV YVGAEVAIGS FLISFLVQPD IGGYTHAEAA HYIAYYFGGA
MVGRFIGAAV MQKIKAGKVL AFNAICACLL VALAIFSAGA MAMWALLLVG LCNSIMFPTI
FSLALQDLEQ HTSQGSGILC LAIVGGAIVP LFQGMLADHF GIQLAFLLPL LCYGFIAYYG
AKGCDAPRPR F