| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1152 |
|---|
| Symbol | rpsT |
|---|
| ID | 5752879 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 1366327 |
|---|
| End bp | 1366593 |
|---|
| Gene Length | 267 bp |
|---|
| Protein Length | 88 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641287422 |
|---|
| Product | 30S ribosomal protein S20 |
|---|
| Protein accession | YP_001553588 |
|---|
| Protein GI | 160874272 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0268] Ribosomal protein S20 |
|---|
| TIGRFAM ID | [TIGR00029] ribosomal protein S20 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000294185 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.185993 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCTAATA GCAAGTCTGC AAAGAAGCGC GCGCTTCAAT CTGAAAAGCG TCGTCAGCAT
AACGCCAGCC GTCGCTCAAT GTTACGTACA TACGTTAAAA AAGTAATCGC TGCAATTAAA
GCAGGCGATC ACAAAACAGC AGCAGAAGCT TTTGCTGTTG CACAACCAAT CGTTGACCGT
ATGGCGACTA AAGGTCTTAT TCACAAGAAT AAAGCCGCTC GTCAAAAGGC ACGTTTGAAC
GCTAAGATCA AAGCAATCGC TGCTTAA
|
|---|
| Protein sequence | MANSKSAKKR ALQSEKRRQH NASRRSMLRT YVKKVIAAIK AGDHKTAAEA FAVAQPIVDR
MATKGLIHKN KAARQKARLN AKIKAIAA
|
|---|
| |