Gene Sbal195_1146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_1146 
Symbol 
ID5752873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp1357859 
End bp1358968 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content44% 
IMG OID641287416 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_001553582 
Protein GI160874266 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins
[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00262556 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.603197 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTGG AGAACATGAT GAATCATAAA TTAAAATTTG TACTGCTTGC ATCGCTATTA 
CCTTTCACTG TATCTGCGGC TCAAGAACTG ACTCCTTGGT ATGTTGGCGC AGGTTTAGGC
GTTAACAACT ATGAACATAT CGCGACCCAG AATGGTCAAG ATGACCCATA TGCATGGGAT
GTATTCGCAG GCTATATGTT CAATGATTAC TTCGGCGCTG AAATCGGCTT CCGTGATTTA
GGTAATGCAG ATTGGACTAA TGGGGCCACC AGTAATGATG CTGGCGTTAA AGGTTCAACG
CTAGGCTTAG TAGGTATTTG GCCTCTAGCT AATCGTTGGA GCTTATCAGC CGAAGCGGGT
GCTATGTATT ATTCACTTGA GAACAGCCAA AATAATGGCA TTACATCAAG CAAATACAGT
ACAAACGACT TTGCTCCATA CTTAGGTGCA GGTGTTGGTT ACAACTTCAC TGATAACCTG
AAGTTACAAG CTAAATATCG TCGTTATGAA AACCTAAATG ACGATTACAA CATCGTTGAA
GCTGATAGCA ACTACTGGGG TCTTGAACTG AGCTACCGTT TCGGTTCACC AGCAGCTGCA
GCACCTGTTG CAGCAGCGGT TATCGCAGCA GCACCTGTTG ACTCAGACAA CGATGGTGTT
TATGACGACA AAGATCAATG TCCAGCCACA CCAGTAACGC ATAAAGTTGA CTCTGTTGGC
TGTACCATTT ACGAAAACGT AAAAAATAAA GAAGACGTGG GTTCAATTCA GTTTGCTAAC
GATTCTGCTG TAGTTAAAAA AGTTTTCTAC AAAGATATCG AAAGACTAGC TAACTACCTG
AACAAGAACC CAGAGTTCAC AGTTGAAATC GCTGGCCACG CCTCTAACGT AGGTAAACCA
GAGTACAACA TGGTGCTGTC TGACAAACGT GCTGACGCAG TTGCCCAAAT TCTTGTTGAG
AAATACGGTA TCAGCCAAAG CCGCGTAACT TCTAACGGTT ACGGTGTTAC TCAGCCATTG
GTTGCTGGTG ACTCGAAAGA AGCTTACGCA GCGAACCGTC GTATCGAAGC CATTGTAACG
ACTACGACTA AACAACCTGT TCTTAAGTAA
 
Protein sequence
MELENMMNHK LKFVLLASLL PFTVSAAQEL TPWYVGAGLG VNNYEHIATQ NGQDDPYAWD 
VFAGYMFNDY FGAEIGFRDL GNADWTNGAT SNDAGVKGST LGLVGIWPLA NRWSLSAEAG
AMYYSLENSQ NNGITSSKYS TNDFAPYLGA GVGYNFTDNL KLQAKYRRYE NLNDDYNIVE
ADSNYWGLEL SYRFGSPAAA APVAAAVIAA APVDSDNDGV YDDKDQCPAT PVTHKVDSVG
CTIYENVKNK EDVGSIQFAN DSAVVKKVFY KDIERLANYL NKNPEFTVEI AGHASNVGKP
EYNMVLSDKR ADAVAQILVE KYGISQSRVT SNGYGVTQPL VAGDSKEAYA ANRRIEAIVT
TTTKQPVLK