| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1091 |
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| Symbol | |
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| ID | 5752812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 1291040 |
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| End bp | 1292764 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641287355 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001553527 |
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| Protein GI | 160874211 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.957867 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCTTC AGCCTTCTTG CTTTACCTCT TTCACACAAG CCATTGATGC CTATGCCCTG
CCGCAACGTT TTACTTTTCC TTTCTATTAC GAACCGCATC CATTATGCGT GCTTGCAGCC
AACGAATTAC AACACCACCT CGAGACTCAG CACGACTGGC AACATAACTT TGGCCTAACG
GGTGAGTTAA CTGGCGCCAT TGGCAAGATG TTCGGCGTAT TGCTGGTACA AAATCCGCAA
GGTGAAGTCG GCTATTTATC TGCATTTTCG GGCAAATTAG CCGAGCAAAA CCATTGGCCA
CGCTTTGTTC CACCTGTGTT TGATATGCTG GCTAAGGACA ATTTTTTCCA CGCCGAAAAT
CTGCAAATCA ACCAAATTAA CGAGCAGCTG TTTGCAGTAG AAAACCATCC CGACATTCCG
AGGCTATCAA CCGAGCTAGA AACTGAACAA GCTCAAGCGC AAGCCGAACT TGACGCCCAC
AGACAAGTGA TGATCGATAG CCGCCAATCT CGCAAGGCGC AGCGTAATCA ACTCGCAGCC
CAATTGGCTG CCAATCCGAC TGATGAGACC TTGCGTGAAA ACGCAATAAC TGAAGCAAAG
CTCAGCCAGG AAAGCATCAG TGAAAAGAAT CAGTTAAGAG ATATTAAACG CTATTGGGAT
GAACGTATTC ATACCATCAG CCAAGCGCTA AGCCAACTGA CAGATGAGCG CGATGCGTTA
CGACAACAGC GTAAGCGGCT CTCGGCGGCG CTGCAGCAAA AGCTGTTTGA GCAGTATCGA
TTTCTCAATG TTAAAGGCAC AGAAAAGAGT CTGAACGGCA TATTTAATGG CACGGTTGAG
TTAACCCCGC CCGCAGGCTC GGGCGAATGT GCCGCGCCTA AGTTGTTACA TTACGCCTTT
AAACATGACC TTAAACCATT GGCGATTGCC GAGTTTTGGT GGGGCGCGCC GCCAAAATCA
GAAATCCGCC AGCATAAGCA GTTTTATCCC GCCTGCCTGC GAAAATGCCA ACCTATTCTT
GGACATATGC TCGAAGGACT CGTGGTTGAT GAGAATCCTC TGCTTACCAA CCCCGCCGAA
GGCAAAACCT TAGCCATCCT CTACCAAGAC GATGCGATGG CGATTGTGAA TAAACCCGCC
GAGTTTTTAT CCGTGCCCGG CAAAGAAATT GAAGACTCAG TGTATTCGCG TATGCGCCAA
ACCTTCCCCC ATACCACAGG GCCACTTATC GTCCATCGAC TCGATATGTC GACCTCGGGA
TTAATGGTGA TCGCGCTGAC AAAAGAGGCC CATAAACAGC TGCAAAAACA ATTTATCCAG
CGCACTGTGA CTAAACGTTA TGTAGCACTT TTAGCGGGAA TGCCTGCGGT AATGGCAAAT
AAGCAGGCGA CGGGTCACAT CTCTTTACCC TTGCGTGGCG ATTTAGACGA TAGACCGAGA
CAACTCGTTT GCCACGAGTT TGGTAAAGCA GCCGAAACCC ATTGGGAATT GAGCCAACTT
GATGAAATGG CACGTACAGC CCGCGTATAT CTGTATCCAA AAACAGGCAG AACCCATCAA
CTCAGAGTTC ACTGCGCCCA CTCAGAGGGG CTAAATACAC CGATTGTCGG TGACGACCTC
TACGGCACTC GCGCCAATCG CCTGCATCTG CATGCGGATT TATTGATGCT TCAGCATCCC
GTTACCCGTG AACGGATGCG CTTTCAGGTC GATCCTGATT TTTGA
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| Protein sequence | MQLQPSCFTS FTQAIDAYAL PQRFTFPFYY EPHPLCVLAA NELQHHLETQ HDWQHNFGLT
GELTGAIGKM FGVLLVQNPQ GEVGYLSAFS GKLAEQNHWP RFVPPVFDML AKDNFFHAEN
LQINQINEQL FAVENHPDIP RLSTELETEQ AQAQAELDAH RQVMIDSRQS RKAQRNQLAA
QLAANPTDET LRENAITEAK LSQESISEKN QLRDIKRYWD ERIHTISQAL SQLTDERDAL
RQQRKRLSAA LQQKLFEQYR FLNVKGTEKS LNGIFNGTVE LTPPAGSGEC AAPKLLHYAF
KHDLKPLAIA EFWWGAPPKS EIRQHKQFYP ACLRKCQPIL GHMLEGLVVD ENPLLTNPAE
GKTLAILYQD DAMAIVNKPA EFLSVPGKEI EDSVYSRMRQ TFPHTTGPLI VHRLDMSTSG
LMVIALTKEA HKQLQKQFIQ RTVTKRYVAL LAGMPAVMAN KQATGHISLP LRGDLDDRPR
QLVCHEFGKA AETHWELSQL DEMARTARVY LYPKTGRTHQ LRVHCAHSEG LNTPIVGDDL
YGTRANRLHL HADLLMLQHP VTRERMRFQV DPDF
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