Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1084 |
Symbol | |
ID | 5752805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 1283472 |
End bp | 1284149 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641287348 |
Product | nucleotidyl transferase |
Protein accession | YP_001553520 |
Protein GI | 160874204 |
COG category | [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.166383 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCCA TGATCTTGGC CGCCGGACGA GGTGAGAGGT TACGGCCGTT AACGGATAAT ATGCCTAAAC CTATGGTGCC AGTATTAGGT AAACCGTTGA TTGTTTACCA TATTGAAAAA CTCGCCGCGT TAGGCATAGT CGATATCGTC ATCAACCATG CTTGGCTAGG GCATAAATTA GTCGAGGCGC TGGGCGATGG CAGCGCTTTT GGGGTGCGAA TTCGCTATAG CGCCGAAGAG AGTGCGCTTG AAACCGGCGG CGGCATTAAA CGGGCTTTGC CTTTATTGTG TGAGGGGGAA AGCGATGAAC CCTTTTTGGT CATTAATGGT GATGTGTTTA TCGATGCCTT ACCGCCAATA ACGCAGCTTG CTGCCGATAC GCTCGCCCAT CTCTGGCTAG TGCCTAATCC TGAGCAGCAT CCGCAGGGGG ATTTCGCCTT GAGTGGCAAT AGAGTGCAGG AGCTTGGTGA GACTAAGTAC ACTTTCTCTG GCATGGGCAT TTATCGGCCG TCGCTGTTTA ATCACACGCC GCAGGGCGCG TTTGCACTCG GTCCGTTGTT GAGAGCACAA ATGGCTCAAG GCCGAGTCAG TGGCGCGCTG TTTCACGGGC TTTGGTGCGA TGTTGGCACG ATAGCACGCT TGCAAGGGCT CGAACTCAGA TTACAAAGCA ATACCTAA
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Protein sequence | MKAMILAAGR GERLRPLTDN MPKPMVPVLG KPLIVYHIEK LAALGIVDIV INHAWLGHKL VEALGDGSAF GVRIRYSAEE SALETGGGIK RALPLLCEGE SDEPFLVING DVFIDALPPI TQLAADTLAH LWLVPNPEQH PQGDFALSGN RVQELGETKY TFSGMGIYRP SLFNHTPQGA FALGPLLRAQ MAQGRVSGAL FHGLWCDVGT IARLQGLELR LQSNT
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