Gene Sbal195_1084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_1084 
Symbol 
ID5752805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp1283472 
End bp1284149 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content52% 
IMG OID641287348 
Productnucleotidyl transferase 
Protein accessionYP_001553520 
Protein GI160874204 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.166383 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCA TGATCTTGGC CGCCGGACGA GGTGAGAGGT TACGGCCGTT AACGGATAAT 
ATGCCTAAAC CTATGGTGCC AGTATTAGGT AAACCGTTGA TTGTTTACCA TATTGAAAAA
CTCGCCGCGT TAGGCATAGT CGATATCGTC ATCAACCATG CTTGGCTAGG GCATAAATTA
GTCGAGGCGC TGGGCGATGG CAGCGCTTTT GGGGTGCGAA TTCGCTATAG CGCCGAAGAG
AGTGCGCTTG AAACCGGCGG CGGCATTAAA CGGGCTTTGC CTTTATTGTG TGAGGGGGAA
AGCGATGAAC CCTTTTTGGT CATTAATGGT GATGTGTTTA TCGATGCCTT ACCGCCAATA
ACGCAGCTTG CTGCCGATAC GCTCGCCCAT CTCTGGCTAG TGCCTAATCC TGAGCAGCAT
CCGCAGGGGG ATTTCGCCTT GAGTGGCAAT AGAGTGCAGG AGCTTGGTGA GACTAAGTAC
ACTTTCTCTG GCATGGGCAT TTATCGGCCG TCGCTGTTTA ATCACACGCC GCAGGGCGCG
TTTGCACTCG GTCCGTTGTT GAGAGCACAA ATGGCTCAAG GCCGAGTCAG TGGCGCGCTG
TTTCACGGGC TTTGGTGCGA TGTTGGCACG ATAGCACGCT TGCAAGGGCT CGAACTCAGA
TTACAAAGCA ATACCTAA
 
Protein sequence
MKAMILAAGR GERLRPLTDN MPKPMVPVLG KPLIVYHIEK LAALGIVDIV INHAWLGHKL 
VEALGDGSAF GVRIRYSAEE SALETGGGIK RALPLLCEGE SDEPFLVING DVFIDALPPI
TQLAADTLAH LWLVPNPEQH PQGDFALSGN RVQELGETKY TFSGMGIYRP SLFNHTPQGA
FALGPLLRAQ MAQGRVSGAL FHGLWCDVGT IARLQGLELR LQSNT