Gene Sbal195_1081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_1081 
Symbol 
ID5752802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp1278428 
End bp1279732 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content46% 
IMG OID641287345 
ProductSurA domain-containing protein 
Protein accessionYP_001553517 
Protein GI160874201 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00545123 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCCA GTAAACATCT GATTTTTGCT TTATTTGCAC TCGCTATCAG CCAACCTACA 
TTGGCCGCAC CTCAGCCGCT CGACCGCGTT GCGGTCCAAA TTAACGACGG CATAGTGCTC
GAAAGTGAAA TCACTAACAT GATTGACACT GTTAAAGCCA ATGCCAAAAC GGCAAACCAA
TCGTTACCTT CTGACAGTGC CCTGCGTACT CAGGTGATTG AACGTTTGAT CTTGACCCGT
TTACAACTGC AAATGGCAGA TCGTATTGGC CTGCATATTG GTGACTTACA ATTAGACCAA
GCGATTGAAA ACATCGCGCG CGAACAAAAA ATGTCTGTGG CGCAGATGCA ACAGAAAATT
GAAAGCGAAG GGTTAAGCTT CAGCCAATAC CGCGAGCAGT TGCGCGAAGA AATCACCCTA
GGTGAAATTC AGCGTATTCA AGTACAACGT CGTATTCAAG TGTCACCACA GGAAATTACT
AGCCTAGTCA AACTCATCCA AGAACAAGGG ATGAAAGATG TGGAATACCA AATTGGCCAC
ATCCTGATTG ACGTGCCAAA TAATCCTACC AGTGAACAAC TGGAATCCTC GAGCAAACGT
GCCAATATCG TTTTGGAGCG TTTAAAGAGT GGTGAAGATT TCCGTCGTAC CGCTATCGCA
TCTTCTTCGG GCCCTAAAGC ACTCGAAGGC GGTATTTGGG ACTACATGAA CATCAACGAA
ATGCCAACCC TGTTCGCCGA AGTGATCAAC GGTGCGAAAA CGGGTGACAT TATCGGCCCT
ATTAAGAGTG GTGCTGGCTT CCATATTATT AAAATCATGG ATGCTCGCGG ACTACAAACC
AAAGAAATTG AAGAAGTCAG AGCGCGCCAC ATTTTGCTCA AGCCATCGCC AATTTTGTCA
GAAGATCGTG CTAAAGCCAT GCTTGAGCAA TTTCTGAAGC AAATTCGCTC AGGTGAAGCT
AAATTTGAAG ACCTAGCGCG TCAATATTCT GAAGATCCAG GTTCAGCCAC TAAAGGCGGC
GAATTAGGTT GGGCAGAGCC AAGCATTTAC GTGCCAGAGT TCGCTCAAAC CCTTAACAGT
TTAAAAACTG ACCAGATCAG TGAGCCATTC CGTACTACTC ACGGTTGGCA CATTACCCAG
TTAGAAGAAC GCAGAAAAAC CGATGCCACG GATCAGTTCA ACAGTAACCG TGCGCACCAG
TTGATCTTCC GTCGCAAATT TAACGAAGAA CTGCAAAACT GGCTAGACGA AATGCGTTCA
GACGCATACA TTGAAATCTT CCAGCCAGAG ACCAATCGAG GTTAA
 
Protein sequence
MKPSKHLIFA LFALAISQPT LAAPQPLDRV AVQINDGIVL ESEITNMIDT VKANAKTANQ 
SLPSDSALRT QVIERLILTR LQLQMADRIG LHIGDLQLDQ AIENIAREQK MSVAQMQQKI
ESEGLSFSQY REQLREEITL GEIQRIQVQR RIQVSPQEIT SLVKLIQEQG MKDVEYQIGH
ILIDVPNNPT SEQLESSSKR ANIVLERLKS GEDFRRTAIA SSSGPKALEG GIWDYMNINE
MPTLFAEVIN GAKTGDIIGP IKSGAGFHII KIMDARGLQT KEIEEVRARH ILLKPSPILS
EDRAKAMLEQ FLKQIRSGEA KFEDLARQYS EDPGSATKGG ELGWAEPSIY VPEFAQTLNS
LKTDQISEPF RTTHGWHITQ LEERRKTDAT DQFNSNRAHQ LIFRRKFNEE LQNWLDEMRS
DAYIEIFQPE TNRG