| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0944 |
|---|
| Symbol | |
|---|
| ID | 5752665 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 1116948 |
|---|
| End bp | 1118678 |
|---|
| Gene Length | 1731 bp |
|---|
| Protein Length | 576 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641287208 |
|---|
| Product | potassium/proton antiporter |
|---|
| Protein accession | YP_001553380 |
|---|
| Protein GI | 160874064 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3263] NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.542405 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATGCAA ATTCCATCAA TAGTTTTTTT CTGATTGGCG CCTTGCTAAC TGCAGTGAGT
GTTTTACTCA GTCCCATGTC TTCCCGTTTG GGTATCCCGA TTCTTTTGAT CTTCCTCGCC
GTGGGTATTT TGGCCGGTGA AGATGGCCCT GGCGGAATAT TGTTTGATGA TTATTCCACC
GCTTATTTAG TCAGTAACTT AGCGCTTGCT ATCATCTTAC TCGATGGTGG TATGCGTACC
CGTGTCGCCA GTTTTAGGGT GGCACTGTGG CCTGCATTAT CGCTAGCGAC CTTTGGCGTC
GCTATCACAA CCAGTATCAC TGGCATGATG GCCGCATGGC TGTTTGACTT GCATTGGTTG
CAAGGTTTGC TGGTGGGCGC GATTGTGGGC TCGACCGATG CCGCCGCGGT ATTCTCCTTA
TTGAAAGGGC GCAGTCTCAA CGAGCGGGTT GGGGCAACCT TAGAAATCGA GTCCGGTAGT
AACGACCCTA TGGCGGTGTT TTTAACCGTG ACGCTGATTG CGATTCTCGC CAATGTGGAC
ACTGAGATGT CCTTCAGCTT TATGTTTATC AGCTTTATTA AGCAATTTGG TCTGGGTATA
TGCTTAGGTT TAGGCGGCGG CTGGATGCTG TGGAAGCTGG TTAATTTGAG CAAATTAGCC
GACGGCCTGT ACTCTATTTT AGTCTTAAGC GGTGGTCTGA TTATTTATGC TGCGTCTAAC
AAACTCGGCG GCAGTGGCAT TTTATCGATT TACTTAGTCG GGCTTTTCCT CGGCAATAAG
CCGACCCGTG GTCGCCATGC GATTTTAAAC GTACTGGATG GCATGACTTG GGTCAGCCAA
ATCGGTATGT TCTTGGTATT AGGGTTATTG CTTACCCCTT CAGATTTAGT CGATATCCTG
ATCCCAGGTT TTGCACTGGC ATTTGGGATG ATTCTATTCG CTCGTCCTGT CGCTGTGTGG
ATCAGCCTAT TGCCCTTTAA GAGCTTCAGC AGTCGCGACC GCTGGTTTAT TTCGTGGGTA
GGACTACGCG GCGCAGTGCC TATCATCTTG GCGGTGTTCC CTATGATGGC GGGCTTACCG
GGTGCTCAGT TGTACTTCAA CTTAGCCTTC TTCGTCGTAT TAGTATCGTT ACTGGTTCAA
GGTGCGTCTT TGACCACTGC GGCGCGTTTA GCTAAGGTGG AACTGCCCCC AAAGCCGTTG
CCCGTTTCGC GTTCGGGAGT TGAAATTTAC CCGAGCAGTG AATGGGAAGT GTTTGTCTAT
CGTTTGAGTG AAAGTAAGTG GTGCATTGGT GAACCGCTAA AACGCTTAGC TATGCCAGAT
GGAACACGGA TTGCGGCGGT ATTTAGGGAT GACACTTTAC TGCATCCGTC GGGCAGTACT
CGCCTCGAAG CGGGAGATAT ACTCTGTGTG CTGGGTCAGG AGAAAAGTTT AGAAGCCTTG
AGTAATCTCT TTAGCCAAGC GCCAGAAAAT AAAGAAGTGC AACGCTTCTT CGGTGATTTC
TTTATTGAAA CAGACGTTAA GCTTGCGGAT CTCGCACCAA TTTATGGCTT GAGCTTAGAT
AATCTCGCCG ATGATATGAC AGTCGCCGAT CTGGTAGTGT TACAGCTTGG CGCTAATCCT
GTGCTGGGCG ATCAGTTCCA ATGGCAATCG CTGCATTGGG TGGTGGCGGG GCTGTATGAA
GGCAAAGTTA CTAACGTCGG TATTCGTTTA CCGACCGAGC ATTCGCTGTA A
|
|---|
| Protein sequence | MDANSINSFF LIGALLTAVS VLLSPMSSRL GIPILLIFLA VGILAGEDGP GGILFDDYST
AYLVSNLALA IILLDGGMRT RVASFRVALW PALSLATFGV AITTSITGMM AAWLFDLHWL
QGLLVGAIVG STDAAAVFSL LKGRSLNERV GATLEIESGS NDPMAVFLTV TLIAILANVD
TEMSFSFMFI SFIKQFGLGI CLGLGGGWML WKLVNLSKLA DGLYSILVLS GGLIIYAASN
KLGGSGILSI YLVGLFLGNK PTRGRHAILN VLDGMTWVSQ IGMFLVLGLL LTPSDLVDIL
IPGFALAFGM ILFARPVAVW ISLLPFKSFS SRDRWFISWV GLRGAVPIIL AVFPMMAGLP
GAQLYFNLAF FVVLVSLLVQ GASLTTAARL AKVELPPKPL PVSRSGVEIY PSSEWEVFVY
RLSESKWCIG EPLKRLAMPD GTRIAAVFRD DTLLHPSGST RLEAGDILCV LGQEKSLEAL
SNLFSQAPEN KEVQRFFGDF FIETDVKLAD LAPIYGLSLD NLADDMTVAD LVVLQLGANP
VLGDQFQWQS LHWVVAGLYE GKVTNVGIRL PTEHSL
|
|---|
| |