| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0872 |
|---|
| Symbol | |
|---|
| ID | 5752593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 1033019 |
|---|
| End bp | 1033981 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641287137 |
|---|
| Product | glycine cleavage T protein (aminomethyl transferase) |
|---|
| Protein accession | YP_001553309 |
|---|
| Protein GI | 160873993 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
|---|
| TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTATTT CAGTTTCTAC GCCCCATTGG GATCTGGACG CTTCTTTGCC TCCACTCATG
CTTGCCAACT TATCTCATAT GGGCCTTATC AAAGTGGTTG GAGAACAAGG CCGCAGTTTC
ATCCATGGCC AAGTGACCAC TGACATCAGT TCATTAGCCG ATAACCAATG GCGCTGGGGC
GCACATTGTG ATCCAAAAGG TAAAATGCTG GCCAGCTTCA GAACCTTTGC CATCCAAGAT
GCGCTCTTTA TGCTGATGCC AAAGGATGCC ATCGAAGTCG ATTTACCCCA GTTACAAAAA
TATGCCGTAT TTAGCAAAGC CACCTTAAGC AATGCATCCG CTGAATGGAC TCTGCTCGGG
GTCGCCGGTG AACAAGCAAG CCAGTTCTTG AGCGAACATT TTGGCGACAT TCATCAAGAA
TTCACGCCCA TTGAACATGG CGCGATTTTA AAAGACGCTG ACCGTTTCAT TTTAATGTTA
ACCCCAGAAG CTGCTGCAGC TTTAGTGGCC AAATCAAAGT TGAGCGTATT TGATGCCAGT
GCTTGGCAAG CGTTAGAAAT TACCGCGGGT TATCCCAACC TTGCCGCCAG CCATGCCAGC
CAATACGTAC CGCAGATGTG CAATCTACAA GCGGTTAACG GTATCAGCTT CAACAAGGGC
TGTTACATGG GACAAGAAAC CATAGCGCGG ATGAAATATC GTGGCGGCAA TAAACGCGCC
CTGTATATTC TGCATGGTCA TACTAATCTG CAAATCAGCC TAGAGTCTGG CCTTGAAATC
GCGATGGAAG ATGGCTTCCG CCGTGGCGGC CATATTATTG AGTTTGTACA GCGTGGCAAC
CAAGTGTTGT TAACTGCGGT GCTTGCCAAC GATACCAGCA ACGAGACTAA ACTGCGTTTT
GCTGACGATG AGCAATCAAG CTTAACGATT CAAGCCCTGC CCTACTCATT AGACGAAGCA
TAA
|
|---|
| Protein sequence | MTISVSTPHW DLDASLPPLM LANLSHMGLI KVVGEQGRSF IHGQVTTDIS SLADNQWRWG
AHCDPKGKML ASFRTFAIQD ALFMLMPKDA IEVDLPQLQK YAVFSKATLS NASAEWTLLG
VAGEQASQFL SEHFGDIHQE FTPIEHGAIL KDADRFILML TPEAAAALVA KSKLSVFDAS
AWQALEITAG YPNLAASHAS QYVPQMCNLQ AVNGISFNKG CYMGQETIAR MKYRGGNKRA
LYILHGHTNL QISLESGLEI AMEDGFRRGG HIIEFVQRGN QVLLTAVLAN DTSNETKLRF
ADDEQSSLTI QALPYSLDEA
|
|---|
| |