Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0822 |
Symbol | |
ID | 5752539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 963090 |
End bp | 964154 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641287084 |
Product | porin |
Protein accession | YP_001553260 |
Protein GI | 160873944 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0441851 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.422579 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGA CTCTGCTGAC TACGGCTATT ATTTCTAGCC TCACACTCTA TTCATTCACA GCACTCGCCG ATGGCCCTGA ATTCTATGGT CATGCTGATC TTGCTATTAC CAACTCAGAC ACAGGTTACG CAACTCAGAA CCAAAAGGAC GGCACTGTCC TTGAAAACAA CTTCTCATGG TTAGGCGTAA AAGGTTCTGA AGCTGTAAGC CCCTATTTTG ACATCATTTA TCAAATGGAA TTTGGCGTCG AAAACTTTGA TAACTCAAAC AAGACGTTCA ATGCCCGTAA TACTTTCCTT GGTATCAGAA GTGCGGCTGG TACTGCCTTA GTGGGCCGTA ACGACACAGT ATTTAAATCA GCTGAAGGTA GCTTCGATCT CTTCGGCAAC ACCAACGCCG ATATCGACTT GCTGGTTGCA GGCCAAACTC GCTCCGCCGA TGGCATTTCT TACTATTCAC CTAAAATTGC CGATCTGGTG ACGCTTAATG CCACCTATCT GATGAGCGAT AACTATGATC AAGTGGATAA CAATGGCGAC GAGGTGTACA GCAAAGATCA CATGTATGCT CTGAGCGCCA CCTTAGGGGA TAAAGCCTTT AAAGCACAAA ACTACTACGT CGCTGCCGCC TATAGTGATG GTATTGATAA TGTCGAAGCC TACCGTGGTG TGGCCCAAGC TAAATTCGGT GACGTGATCT TAGGTGCCTT ATATCAACAC AGTGAACATG TGGATGATAA GTTTGCCAAT CTCTCAGGTG ATACCTACTT CGTCAACGCG GCTTACTTAA TTGGCGACTT AAAATTGAAG ATGATGTACG GCAAAGATGA CTCAGGTTTA GGTAAATACG TGAGCCGTTA TGTCGGTGAC CAAAACAACA GCGGTTTGGA ACAGGTTCGC GATGTTGACC TGCAACAGTT CAGTGTGGGT GCGGATTACC GTCTGAGCAC TAAGACTATG GTCTATGGTC ACTACACGCG CTTCGATGGT GATCTTATGT TGGCCGATGT GAAGCAAGAC CTTAATGACA ACGTCTTTAC TGTTGGTTTA CGCGTTGATT TTTAA
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Protein sequence | MKKTLLTTAI ISSLTLYSFT ALADGPEFYG HADLAITNSD TGYATQNQKD GTVLENNFSW LGVKGSEAVS PYFDIIYQME FGVENFDNSN KTFNARNTFL GIRSAAGTAL VGRNDTVFKS AEGSFDLFGN TNADIDLLVA GQTRSADGIS YYSPKIADLV TLNATYLMSD NYDQVDNNGD EVYSKDHMYA LSATLGDKAF KAQNYYVAAA YSDGIDNVEA YRGVAQAKFG DVILGALYQH SEHVDDKFAN LSGDTYFVNA AYLIGDLKLK MMYGKDDSGL GKYVSRYVGD QNNSGLEQVR DVDLQQFSVG ADYRLSTKTM VYGHYTRFDG DLMLADVKQD LNDNVFTVGL RVDF
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