Gene Sbal195_0652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_0652 
Symbol 
ID5752369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp787869 
End bp789320 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content49% 
IMG OID641286914 
ProductMltD domain-containing protein 
Protein accessionYP_001553090 
Protein GI160873774 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1388] FOG: LysM repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGAAAC ATTTTCGCCA AACGCACTCT TTTACAGTGC TAATGCTGGC CATGTTCGTG 
GCCCAATTGA GCGGTTGCGC GACCACGTCG GCAAGCCCAT CGACCACAGA ATTCAGTGCC
CCAGCAAATG ATGTGAGTAA CGGTAGCGAC CACTCGCCAC AACACCAGCA GCACACGCCA
CCCGCTGTGG TTGAGCAGTA CAGCGACGTT TGGGAAAAGA TCCAACACGC CAATACCATT
GACGTACATG ACGATGCCGA AGTGCGCAAA CAGCGTAACT TTTTCGATGA TAAACAGAAA
TTTATGAACC AAGTCGGCGA ACGCGCCGAG CCCTTTTTGT ATTACATCGT CAGCCAGCTC
GAAGCCCGTA ACATGCCATT AGAATTGGCG TTATTACCCA TAGTCGAGAG TGGTTACAAT
CCACTGGCGC AGGCAAATGG CCCGGCTGGA CTGTGGCAGA TGATCCCCGC CACGGGGCGT
AATTTTGGCT TAACGGTTAA CTCTGCCTAC GACGGTCGCA AAGATGCGCT GGCCTCAACC
GATGCCGTGC TCGACTATCT ACAGCATTTA TACGACACCT TAGATCACGA CTGGATCAAC
GCCGTCGCAG CATACAATAC CGGTGAATTG GTGATTAAAG CCGCCATCGA CAAGAACAAA
GCCAAGGGTA AACCGACGGA CTTTTGGTCG CTGGGCATTC CGGCGAAACG CGTACAAACT
GTGCCTAAGT GGCTGGCGTT TATTCAAATT ATTCGCGCCC CTAATCATTA CAATCTAAAA
GTACGGCCGA TAGCTAACCG CCCTTACTTG GATAGAGTAC CTGCACCCAA TGGCGTGGAT
ATCGGCCAAA TCGCCAATGC GGCTGGGCTG AGCAAGGCAG AATTTAAAAC CTATAACCCT
GGCTTTCGCC AAGGCGTGAT CCCGATCAAA GGCAAATATC AAATCGCCTT ACCGCTGGAA
AACATAGGTC AATATCAAGA AAATCACGAC AAACTCTACG CCCAAAAACG CTATGACAGC
CAAAGCTACA TCGTTAAATC CGGCGACAGC CTAGGCACAA TCGCGGCTAA GTTTGATACG
TCAGTCAAAG CATTAAAACA GGCTAATAAT CTGACCTCTG ACCGTCTCAA AGTCGGCCAA
GAGCTCACAC TATTAACGCC AATGGCAGCC AATGATAATG CACCTGAACC CGCTAAAGCC
AATACTAAGG CCGATAGCAA AGTCAGCAGC AAGTCATCGA CTAAAGCAAA CGCCAGTGGC
ACTAAAGCCA CCAGCTCAAA ATCGGCCGAC AAACCAGCGG CAAAAGCGAA AACCTATAAA
GTGAAATCCG GCGATTCACT GGATAAAATC GCCCGTAAGA ATAAGGTCAA ACTGGCTGAT
TTAATGAAGT GGAACCAGCT CAATGGCAAA AGCATTATTA AGCCAGGCCA AGAACTGAAA
ATCAGCGAAT AA
 
Protein sequence
MRKHFRQTHS FTVLMLAMFV AQLSGCATTS ASPSTTEFSA PANDVSNGSD HSPQHQQHTP 
PAVVEQYSDV WEKIQHANTI DVHDDAEVRK QRNFFDDKQK FMNQVGERAE PFLYYIVSQL
EARNMPLELA LLPIVESGYN PLAQANGPAG LWQMIPATGR NFGLTVNSAY DGRKDALAST
DAVLDYLQHL YDTLDHDWIN AVAAYNTGEL VIKAAIDKNK AKGKPTDFWS LGIPAKRVQT
VPKWLAFIQI IRAPNHYNLK VRPIANRPYL DRVPAPNGVD IGQIANAAGL SKAEFKTYNP
GFRQGVIPIK GKYQIALPLE NIGQYQENHD KLYAQKRYDS QSYIVKSGDS LGTIAAKFDT
SVKALKQANN LTSDRLKVGQ ELTLLTPMAA NDNAPEPAKA NTKADSKVSS KSSTKANASG
TKATSSKSAD KPAAKAKTYK VKSGDSLDKI ARKNKVKLAD LMKWNQLNGK SIIKPGQELK
ISE