Gene Sbal195_0640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_0640 
Symbol 
ID5752357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp767771 
End bp768838 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content47% 
IMG OID641286902 
Productporin 
Protein accessionYP_001553078 
Protein GI160873762 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAGT TCAAACTAAC ATCAGCCGTG CTTGTGCTGA GCTTTGCCAC ACCTATCTTT 
GCTGTTCAAG CCAATGATAC CGCTGCAACC AATGACGAGT TACGCACTGA GTTACAACAA
ATTCAGCAGA GACTCGCCAT GCTCGAAGCC CAAGAAAAAG AGGCGTCGGT TTTATCGGAT
ACTCAGTTTA ATTTTTATGG TTCTTTACGC CCGACATTCG GCCTGACCCA CACTAACTCC
GACGATGTGT GGGATGTTGG CGATGCGAAC TCGCGAATTG GCTTTGCCGC AGAACACCAA
CTTGGCAATG GCTTAGTCGG GTTTGCGAAA GGGGAATTTA AGGTCGATAT CAAAGATGAC
GGCGACTTTG GCGATGCGCG CAAAGCTTAT GTTGGATTAA AAGGATTTTT TGGTAGCGTA
GCAATAGGTA AACAAGCCGT TACCCAGGAA ATCATTTCCG ATCCCGTCGA CATCTTTAAC
CGCTCAGGAA CCCCACTCGC CTATGACAGT GCGAGCCCCT TCAGACTCAA TAACTTAGTG
ACCTATCGTA AAGAATTTGG CGACCTGTTA TTTTCGGCCG ATGCACAATT CGATGGCAAT
AAAGGCAGTG GCGGCAGCGA CTTCGTTAAC GCGGGTATCC GTTATAAAAC TGACCTAATC
TATATAGCAG CAGCTTTTTA TAACAAAGAG TTAGACGACG GCAAAGATGA GAACACTGTC
GGCGTCACCC TAGCAAAAAG TTTCAATGCC TTGTACCTCG CGGCAGCCTA TCAAAACATT
GAAAAAGACG ATATCGATGG AACCACATTG GATGGCTCAA CACTCGATGT GGTCGCGTGC
TATCCCATCA CTGACAGCTA TAAAATCAAG CTGGGCGTGT CCAGATACGA CGATGGTGGC
AATGACATCA CCTCTGCTAA ATACAACGCC TATAACACTA CGCTGGAGTG GCATAAAACA
CCGCAATTCA GCACCTTCAT CGAATATCAA AAGACAGATT TTGAATACCG CGAAACCAAT
GACCAGATCA TGCTGGGCAT GCGTTATAAC TTCGATTACA CGTTCTAA
 
Protein sequence
MKQFKLTSAV LVLSFATPIF AVQANDTAAT NDELRTELQQ IQQRLAMLEA QEKEASVLSD 
TQFNFYGSLR PTFGLTHTNS DDVWDVGDAN SRIGFAAEHQ LGNGLVGFAK GEFKVDIKDD
GDFGDARKAY VGLKGFFGSV AIGKQAVTQE IISDPVDIFN RSGTPLAYDS ASPFRLNNLV
TYRKEFGDLL FSADAQFDGN KGSGGSDFVN AGIRYKTDLI YIAAAFYNKE LDDGKDENTV
GVTLAKSFNA LYLAAAYQNI EKDDIDGTTL DGSTLDVVAC YPITDSYKIK LGVSRYDDGG
NDITSAKYNA YNTTLEWHKT PQFSTFIEYQ KTDFEYRETN DQIMLGMRYN FDYTF