Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0640 |
Symbol | |
ID | 5752357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 767771 |
End bp | 768838 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641286902 |
Product | porin |
Protein accession | YP_001553078 |
Protein GI | 160873762 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAGT TCAAACTAAC ATCAGCCGTG CTTGTGCTGA GCTTTGCCAC ACCTATCTTT GCTGTTCAAG CCAATGATAC CGCTGCAACC AATGACGAGT TACGCACTGA GTTACAACAA ATTCAGCAGA GACTCGCCAT GCTCGAAGCC CAAGAAAAAG AGGCGTCGGT TTTATCGGAT ACTCAGTTTA ATTTTTATGG TTCTTTACGC CCGACATTCG GCCTGACCCA CACTAACTCC GACGATGTGT GGGATGTTGG CGATGCGAAC TCGCGAATTG GCTTTGCCGC AGAACACCAA CTTGGCAATG GCTTAGTCGG GTTTGCGAAA GGGGAATTTA AGGTCGATAT CAAAGATGAC GGCGACTTTG GCGATGCGCG CAAAGCTTAT GTTGGATTAA AAGGATTTTT TGGTAGCGTA GCAATAGGTA AACAAGCCGT TACCCAGGAA ATCATTTCCG ATCCCGTCGA CATCTTTAAC CGCTCAGGAA CCCCACTCGC CTATGACAGT GCGAGCCCCT TCAGACTCAA TAACTTAGTG ACCTATCGTA AAGAATTTGG CGACCTGTTA TTTTCGGCCG ATGCACAATT CGATGGCAAT AAAGGCAGTG GCGGCAGCGA CTTCGTTAAC GCGGGTATCC GTTATAAAAC TGACCTAATC TATATAGCAG CAGCTTTTTA TAACAAAGAG TTAGACGACG GCAAAGATGA GAACACTGTC GGCGTCACCC TAGCAAAAAG TTTCAATGCC TTGTACCTCG CGGCAGCCTA TCAAAACATT GAAAAAGACG ATATCGATGG AACCACATTG GATGGCTCAA CACTCGATGT GGTCGCGTGC TATCCCATCA CTGACAGCTA TAAAATCAAG CTGGGCGTGT CCAGATACGA CGATGGTGGC AATGACATCA CCTCTGCTAA ATACAACGCC TATAACACTA CGCTGGAGTG GCATAAAACA CCGCAATTCA GCACCTTCAT CGAATATCAA AAGACAGATT TTGAATACCG CGAAACCAAT GACCAGATCA TGCTGGGCAT GCGTTATAAC TTCGATTACA CGTTCTAA
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Protein sequence | MKQFKLTSAV LVLSFATPIF AVQANDTAAT NDELRTELQQ IQQRLAMLEA QEKEASVLSD TQFNFYGSLR PTFGLTHTNS DDVWDVGDAN SRIGFAAEHQ LGNGLVGFAK GEFKVDIKDD GDFGDARKAY VGLKGFFGSV AIGKQAVTQE IISDPVDIFN RSGTPLAYDS ASPFRLNNLV TYRKEFGDLL FSADAQFDGN KGSGGSDFVN AGIRYKTDLI YIAAAFYNKE LDDGKDENTV GVTLAKSFNA LYLAAAYQNI EKDDIDGTTL DGSTLDVVAC YPITDSYKIK LGVSRYDDGG NDITSAKYNA YNTTLEWHKT PQFSTFIEYQ KTDFEYRETN DQIMLGMRYN FDYTF
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