| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0580 |
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| Symbol | |
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| ID | 5752297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 674202 |
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| End bp | 675569 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641286842 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001553018 |
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| Protein GI | 160873702 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000944901 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0306529 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAACA ACGGACTTTC GGGTACTGAG AAAAAAGTCG CGTTTTCTTT AGCCAGTGTA
TTTGGTTTAC GCATGATGGG CTTGTTTATG ATCATGCCCG TCTTTGCACT TTATGGTCAG
CACCTCGAAG GCTTCTCGCC GCTGTGGGTC GGTATTGCTA TCGGCGCCTA CGGTCTGACT
CAAGCTGTGC TGCAAATCCC TATGGGGATT TTATCTGACA AATACGGTCG CAAGCCGATT
ATCCTTATCG GTCTGGTGCT GTTTGCCATT GGTAGCTTGA TTGCCGCCAA TGCTGATTCG
ATTTACGGCG TGGTGTTTGG TCGAGCAGTG CAGGGCATGG GTGCGATTGC GGCTGCCGTG
TTGGCGTTGG CAGCGGATTT AACCCGCGAT GAACAGCGTA CTAAGGTCAT GGCGATTATT
GGTATGTGTA TCGGCGGCTC TTTTGCGCTG TCCTTACTGG TCGGCCCGAT TGTGGCACAA
CATGTGGGCT TATCAGGCCT GTTCTTCCTC ACGGCGATTC TCGCTGTGAC GGGCATGTTG
ATCGTGCAAT TTTTAGTACC GAATCCGATT TCCCACGCGC CTAAGGGCGA TACGTTAGCC
ACGCCTGCCA GACTCAAGCG TATGTTGACC GATCCCCAGT TGTTTAGACT CGATGCGGGG
ATCTTTATTC TGCATTTAGT GTTAACCGCA GTATTTGTGG CCTTGCCGCT GGATCTGGTG
GATGCGGGGC TCGTGAAAGA AAAACACTGG ATGCTGTATT TCCCTGCTTT TGTGGGCGCG
TTTTTCTTGA TGGTGCCGTT AATCATCATT GGGGTTAAAC GTAAGAATAC TAAAGCTATG
TTCCAAATCG CCTTAGTGAT CATGATAGTG GCGCTACTGG CGATGGCTTT ATTCTCTAAC
AACTTATGGG TGTTGAGCTT TGCCGTGGTG CTGTTTTTCA CTGGCTTTAA CTATTTAGAA
GCCTCATTGC CCAGTTTGAT TGCCAAATTT TGCCCCGTCG GTGAAAAAGG TTCGGCCATG
GGCGTGTATT CCACTAGCCA GTTTTTAGGG GCCTTTTGTG GTGGTATGCT GGGCGGTGGC
GCCTTCCAAT TAGTGGGCGC GGTCGGGGTG TTTATTGTTG CTGTGATCTT AATGTCTATC
TGGTTATTCC TGACATTGGG CATGGAAAAT CCCGTGCTGT TAAAGAGTTA CACCTTAGAA
GCCGAAGTCA AAGACAAGGC ACAAGCGCGG GATATGGCGG CTCAGTTATC ACAGCTCATG
GGCGTCGTCG AAGCGATCGT CGTGTTGGAC GAGAAAGTGG CTTACTTAAA GGTTGATGAG
CATTTCGATT TAAGAGAAGC ACGAGCTGTG TTAGGCTCTG CTCAATAA
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| Protein sequence | MGNNGLSGTE KKVAFSLASV FGLRMMGLFM IMPVFALYGQ HLEGFSPLWV GIAIGAYGLT
QAVLQIPMGI LSDKYGRKPI ILIGLVLFAI GSLIAANADS IYGVVFGRAV QGMGAIAAAV
LALAADLTRD EQRTKVMAII GMCIGGSFAL SLLVGPIVAQ HVGLSGLFFL TAILAVTGML
IVQFLVPNPI SHAPKGDTLA TPARLKRMLT DPQLFRLDAG IFILHLVLTA VFVALPLDLV
DAGLVKEKHW MLYFPAFVGA FFLMVPLIII GVKRKNTKAM FQIALVIMIV ALLAMALFSN
NLWVLSFAVV LFFTGFNYLE ASLPSLIAKF CPVGEKGSAM GVYSTSQFLG AFCGGMLGGG
AFQLVGAVGV FIVAVILMSI WLFLTLGMEN PVLLKSYTLE AEVKDKAQAR DMAAQLSQLM
GVVEAIVVLD EKVAYLKVDE HFDLREARAV LGSAQ
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