| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0538 |
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| Symbol | rimO |
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| ID | 5752255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 622571 |
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| End bp | 623989 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641286800 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_001552976 |
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| Protein GI | 160873660 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAGTTG AAACTTTTAA ACCCAAGCAA ACGACCACGC TTGATATCCC AGTAAAAACA
TTAGAAGCAG CAAGCACTAA TGCTGTTACC ACTGGGAATC GCATCGGTTT CGTGTCTTTG
GGCTGCCCAA AAAACCTCGT GGATTCAGAG CGTATTCTGA CTCAGTTACG CATCGACGGC
TACGAAGTGA CTAACAGCTA CGACAATGCC GACTTAGTTA TCGTCAACAC CTGCGGCTTT
ATCGATGCTG CGGTTGAAGA ATCTCTGGAT GCTGTGCGTG AAGCCTTAGA AGAAAACGGC
AAAGTGATCG TAACTGGCTG CCTTGGCGCC AAAGAAAACC AAATCCGCGA AGTGCACCCA
GATGTGTTAG AAATCACTGG CCCACACAGC TACGAAGCTG TGTTGAAGCA CGTTCACAAA
TATGTGCCTA AGCCAGAACA CAACCCTTTC ACATCATTAA TCCCACAAAC TGGGGTTAAG
TTAACGCCTA AGCATTACGC TTATTTAAAG ATTTCAGAAG GTTGCGACAA CCGTTGTACT
TTCTGCATTA TTCCTTCACT ACGTGGCGAT CTCGACAGCC GCCCAGCTGG CAGCATCTTA
GATGAAGCCA AGCGTCTAGT TGAATCAGGC GTACAAGAAA TTCTAGTCGT GAGCCAAGAC
ACCTCGGCCT ACGGCAAAGA CAAAGGCGGT CGTACCGATT TTTGGAACGG TATGCCAGTC
AAGCAAGACA TTACTAGCCT AGCTCGCCAA CTGGGTAAAA TGGGCGCTTG GGTGCGTCTG
CATTATATCT ATCCATACCC ATGGGTTGAC GATTTGATCC CGCTGATGGC CGAAGGTTTG
ATCCTGCCGT ATTTGGATAT TCCAATGCAG CATGCAAGCC CACGTATTCT GAAGATGATG
AAGCGTCCAG GCCGTGTTGA CCGTCAGTTA GAAGCGATTC AACGCTGGCG TGAAATTTGT
CCCGATCTAG TGATCCGCTC AACCTTCATC GTCGGCTTCC CAGGTGAGAC AGAAGAGGAT
TTCCAAATCC TGCTCGATTT CTTAAAAGAA GCACGTCTTG ATCGCGTAGG TTGCTTTAAG
TATTCAGAAG TGGATGGCGC TGTCGCCAAC ACCATCGCCG AACTTATCAG CGAAGAAGTG
AAAGAAGACA GATACCACAG ATTTATGGAA GTCCAAGCCG AGATCAGCGC CGAGCGTTTA
GCCCGTTTCG TTGGCCGTAC CTTAGACATT CTGATTGACG ATGTAGACGA AGAAGGCGCC
ATTGGCCGCA GCTTCGCCGA TGCACCTGAA ATCGACGGTA TGGTGTTTAT CAATGGTGAA
ACTGAGTTGG AGCCTGGCAT GTTAGTGCGT GCCCGCATCA CCCATTCAGA CGAACACGAT
CTATGGGCCG AAGTAGTAGA CGCTGACACC CAAGACTAA
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| Protein sequence | MTVETFKPKQ TTTLDIPVKT LEAASTNAVT TGNRIGFVSL GCPKNLVDSE RILTQLRIDG
YEVTNSYDNA DLVIVNTCGF IDAAVEESLD AVREALEENG KVIVTGCLGA KENQIREVHP
DVLEITGPHS YEAVLKHVHK YVPKPEHNPF TSLIPQTGVK LTPKHYAYLK ISEGCDNRCT
FCIIPSLRGD LDSRPAGSIL DEAKRLVESG VQEILVVSQD TSAYGKDKGG RTDFWNGMPV
KQDITSLARQ LGKMGAWVRL HYIYPYPWVD DLIPLMAEGL ILPYLDIPMQ HASPRILKMM
KRPGRVDRQL EAIQRWREIC PDLVIRSTFI VGFPGETEED FQILLDFLKE ARLDRVGCFK
YSEVDGAVAN TIAELISEEV KEDRYHRFME VQAEISAERL ARFVGRTLDI LIDDVDEEGA
IGRSFADAPE IDGMVFINGE TELEPGMLVR ARITHSDEHD LWAEVVDADT QD
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