| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0500 |
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| Symbol | |
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| ID | 5752217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 572371 |
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| End bp | 574314 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641286762 |
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| Product | regulatory protein CsrD |
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| Protein accession | YP_001552938 |
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| Protein GI | 160873622 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCA CCCGAATGTT AACTACAAAA TTAACCAGCT TTTGGTTAAT GTCATTAGCC
GCTATTGCCT TCGTATTTTT GCTGAGCGCT ATGATGAGTT TCGTGCAGCT GACCTATAAA
TTTCAGCAGC AGAAAGTCGC CGAACTCGAA ACTATGTTAG TGGACCAATA TCAACACCAA
CCCGATTGGG ATTTGGAAGC TTGGCTGCCG CCCATGCTGC TCGCCTACAA TGCTGTTGAT
TTTCGGCTGA CCTTGAAAGA TGAAGTGATC TTTGCCTATG AAGGCAATCT CACTACGCAA
AATGCCATGG TGTATGACCA TGTGTTAGAT CCAAAATCTG GTCTGCGTAT GCAGCTGACC
TTGACCCAAC CCTTCGAGCA TTACACTTTT AGTTGGTATG AAATCCTCAT CCTGTTGGTC
GGTGTGTTAG CTGTGGCTGC CTTAGTGCGT TTTGGCTATT TATGGTTTTC CCAGCAATTG
GATGGCATTG AAGAATTAGC CTTACGCAGT CGATTGATCT TGCAAGGTAA GCACGAGCAA
GCACTCGCGA CTCCCGGAAA TGGCAAGCCA AGGCTGATTA ACCGTGCTTT GACCAAGTTG
TTAGAAGAAT TACAAGACGC ACAAAAAGAG CGCGGTCGTT TTGACAAGTT CATTCGTTCT
AATACCTTTC TCGATGCGGA AACGCGCATT GGTAATCGAC TTTTCTTAAA TAACCGTCTC
GACGCCCTTA GTCATAATCA GGCGATGCTC GCCCATGGGG TGATTTATTT ATTAGAGATG
GATGATCTGG ATTTACTGCA GCAATCCCAA GGTGAAGCGG TAACCAAAGA GTTATTAAAC
TCAACAGTTA ACGCGATAAG CCAACTGTTA CAAACCCAAG CTAACAGTAT TTTTGCCCGT
CGTTCCCACA ATCAATTTGC CATAGTCGTG CCGCAAATCT CGTTAATCGA AGCTGACCAA
TTTGCCAGTA AGTTGCTTAA GATATGTTTG AGCCAGCCTT TACCCGAAGT CGAGAATAGC
GATAACTTTT TCCACCTCGG ATGCGCTTAT TTTACCGCAG GCGACAATGC GGCGCAGTTA
ATTGAAGAAG CCGATATGGC TTTGAGGGCG GCACAATTAC AGGGTAACAG TAATTGGTTT
ATGTACGACA AAGGCGCGAT TGATGAAGAG TTTGCTAAAG GCTCGGTGCG TTGGCGTAGC
TTTTTAGAAA ACGCGTTAGT GCAAAGGCGA TTCTTCCCCT TTAGCCAGCC GATAATTGAT
TCAGATGGTA ATGAGCACCA TAAAGAGATA TTTACTCGGG CGCGGGATAA TCAAGGAGCG
TTAATTCGTG CCACACTGTT TATTCCAATG GCGAATAAAT GTGGTTTAAT GCCGCAAGTC
GAACGGCAAA TTATTGAGCG GGTATTATTG TTACTGTCGA ATGAATTAGC GGACGGCGTG
TCGAATACTC AAAAAAATAA GAAATCAGCG CCACAGATAT ACAGTATAAA TCTGAGTTTG
GATTCGCTAA TGAGTCGAGC TTTTACCCAA TGGCTAAAAA CGACGCTGTT AGAATATCGT
CATCTGACCA CGCGACTGAT TTTCGAAGTG TCGGAAGATA TCGTTATTCA ACATCAAGAA
AAGTTGCAGC CTAAATTAGA TATGATCCGT AAAATGGGCG CGAGATTATG CGTTGATCAT
GTAGGCCAGC AGGTCGTTGG CACTTACTAT ATTCGTGAAT GTCATTTTGA TTTAATTAAG
CTACATAGAT CGATTGTGCG GCATATTCAT TTACGCCCAG AAAACCAATT ATTCATCCGT
AGCTTGATTG GCGGTTTGTA TCGAACGGAA GTGCAAGTTT GTGCCGAAGG GGTTGAAGTC
TTCGAAGAAT GGCAGACACT GCAAATCCTT GGCGTTGGCG CAGCGCAGGG AATGTATTTC
AGTGACCCCA TAGAGGCTAA GTAA
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| Protein sequence | MKFTRMLTTK LTSFWLMSLA AIAFVFLLSA MMSFVQLTYK FQQQKVAELE TMLVDQYQHQ
PDWDLEAWLP PMLLAYNAVD FRLTLKDEVI FAYEGNLTTQ NAMVYDHVLD PKSGLRMQLT
LTQPFEHYTF SWYEILILLV GVLAVAALVR FGYLWFSQQL DGIEELALRS RLILQGKHEQ
ALATPGNGKP RLINRALTKL LEELQDAQKE RGRFDKFIRS NTFLDAETRI GNRLFLNNRL
DALSHNQAML AHGVIYLLEM DDLDLLQQSQ GEAVTKELLN STVNAISQLL QTQANSIFAR
RSHNQFAIVV PQISLIEADQ FASKLLKICL SQPLPEVENS DNFFHLGCAY FTAGDNAAQL
IEEADMALRA AQLQGNSNWF MYDKGAIDEE FAKGSVRWRS FLENALVQRR FFPFSQPIID
SDGNEHHKEI FTRARDNQGA LIRATLFIPM ANKCGLMPQV ERQIIERVLL LLSNELADGV
SNTQKNKKSA PQIYSINLSL DSLMSRAFTQ WLKTTLLEYR HLTTRLIFEV SEDIVIQHQE
KLQPKLDMIR KMGARLCVDH VGQQVVGTYY IRECHFDLIK LHRSIVRHIH LRPENQLFIR
SLIGGLYRTE VQVCAEGVEV FEEWQTLQIL GVGAAQGMYF SDPIEAK
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