Gene Sbal195_0452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_0452 
Symbol 
ID5752169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp519873 
End bp520787 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content52% 
IMG OID641286716 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_001552892 
Protein GI160873576 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGA TCATGGTAAC TGGCGCGACT GGGCTACTCG GCCGAGCTGT TGTAAAACAG 
CTCGAATTAA CGGGACATGA GGTTGTGGCC ACAGGTTTTA GCCGCGCAAG TGAACGAGTG
CATAAACTCG ATCTGACCGC CCCTTTGGCT GTCGAAGCAT TTATCGCCCG CGAGCAACCG
CAAGTCATAG TGCACTGCGC CGCCGAGCGG CGCCCCGATG TGTCGGAGCA AAATCCGCAG
GCGGCATTGG CACTTAACTT AACTGCCAGC CAAGCCCTCG CTATGGCAGC CAAGGCCAAT
AACGCTTGGC TTATCTATAT CTCCACCGAC TATGTGTTCG ATGGTACTCA GCCTAAGTAC
GCCGAAGATG CCGCCACTCA TCCGGTTAAT TTTTATGGTG AATCTAAGTT AAAGGGCGAA
GAAATAGTGC TTAACACGAG TGATGATTTT GCCGTGCTAC GCTTGCCAAT CCTTTACGGC
CAAGTCGAGA AGCTGAGTGA ATCTGCTGTG CTAGTGCTGG TTAACCAATT GATTGAAAGT
CGCGCTCAGG GTGTCGATCA TTGGGCCGTG CGAAGTCCAA CTTCAACCGC CGATATTGCC
CAAGCCATAG ATAAGATGAT TGCACAGCAT ATTGAAGCAC CTATCGTGCA GGGTATTTAT
CACTTTAGCG CCGCAGAGAC CATGACCAAG TATCAGATGT TGCTGACCTT AGGGGAGATT
TTACAACTCA GTACGGCGCA CTTAACGCCT GAGTCGACAC CGACGGATAA TGCCAAGCGG
CCAAGGGACT GTAGCTTGAG TTGTGCACGT TTAGCGGCGC TCGGTATTCG CTCCGATATT
GATTTCGCCA CTGGCGCACG CAAAGCATTA ACGCAATCGA GTGGCGCACT GGCCGCACTC
GGACTCACAC TGTAG
 
Protein sequence
MAKIMVTGAT GLLGRAVVKQ LELTGHEVVA TGFSRASERV HKLDLTAPLA VEAFIAREQP 
QVIVHCAAER RPDVSEQNPQ AALALNLTAS QALAMAAKAN NAWLIYISTD YVFDGTQPKY
AEDAATHPVN FYGESKLKGE EIVLNTSDDF AVLRLPILYG QVEKLSESAV LVLVNQLIES
RAQGVDHWAV RSPTSTADIA QAIDKMIAQH IEAPIVQGIY HFSAAETMTK YQMLLTLGEI
LQLSTAHLTP ESTPTDNAKR PRDCSLSCAR LAALGIRSDI DFATGARKAL TQSSGALAAL
GLTL