Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0234 |
Symbol | |
ID | 5751940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 269161 |
End bp | 271140 |
Gene Length | 1980 bp |
Protein Length | 659 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641286489 |
Product | cytochrome c-type biogenesis protein CcmF |
Protein accession | YP_001552676 |
Protein GI | 160873360 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1138] Cytochrome c biogenesis factor |
TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF [TIGR03145] cytochrome c nitrate reductase biogenesis protein NrfE |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000102489 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.153231 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCCAG AACTTGGACA CTTTGCGCTG ATAATAGGGG TGGCTTTTGC CTTCTTATTA ATCAGCGTCC CCCTAATAGG TGTTGCCCGT AAAGATCAAT ACCTTGTTAG GTATGCTTGG CCGTTAACGT ACGGAATGTT CTTTTTTATC ACTGTATCAG TTATCGTGCT GGCCTATAGC TTTGCCGTCG ACGATTTCTC AGTCGCCTAT GTGGCACATC ACTCTAATTC TCAGTTACCT ATCTTCTTTA AGATTTCGGC CGTATGGGGC GGTCATGAAG GGTCACTGTT GTTCTGGGTG TTTGCTTTAT CGACTTGGGC TGCAGCGGTT GCCTTATTTA GTAAAGGTTT AGAGGAAGTG TTTACTGCGC GTGTACTGGC AGTATTAGCA CTGATCGTGA TTGGCTTTAG CTTATTCATG CTTCTCACCT CTAGCCCATT CGAACGTTTG TTCCCGATAC CTGCCGAAGG CCGTGACTTG AACCCAATGC TGCAGGATGT GGGATTAATC TTCCACCCAC CTATGCTGTA TTTAGGTTAT GTGGGCTTCT CAGTGAGCTT TGCATTTGCG ATTGCCGCGC TGATGAGCGG TCGTCTCGAT TCTGCATGGG CTCGTTGGAC GCGTCCTTGG ACCTTAGCCG CTTGGATCTT CCTAACTGGA GGTATCGCGC TAGGTTCTTG GTGGGCATAT TATGAATTAG GCTGGGGCGG TTGGTGGTTC TGGGATCCTG TTGAGAACGC CTCTTTCATG CCTTGGTTAG TGGGTACTGC GCTCGTTCAC TCTTTGATTG TGACCGAGAA ACGCGGCGCT TTCCGTAACT GGACCGTATT ACTGTCTATC TTCGCTTTCT CTTTAAGTTT GCTTGGTACC TTTATTGTTC GCTCAGGCGT ATTAACCTCA GTGCATTCAT TCGCAGCCGA TCCAAGCCGC GGTATGTTTA TTCTGTTGTT ACTTGGCTTA GCGATTGGCG GTTCATTAAC ACTGTTTGCC TTCCGCGCCA GTGAAATGAG CAGTCCAGCC CGTTTCGAGC TGAAGTCTAA AGAAACCATG CTACTGGTCT GTAACGTGTT ACTGACCGTT GCCGCAGGTA CTGTGCTATT GGGTACACTC TATCCATTGC TCATCGATGC ACTCGGCATG GGTAAAATTT CTGTAGGACC TCCATACTTC AACGCTGTGT TTGTGCCTAT CGTATTAGTC TTATTTGGCT TTATGGGTAT TGGTCCAATT ATCCGTTGGA AAAAATCGAA AGCAGGCGAG CTTAGGCGTC AGCTATTGAT CCCTGCAATG GTTGCTGCGG CTATCGGTAT TGTGACGCCA TTTATCGTTG ATGGTGTATT CAACATTTGG GTTGCCTTTG GTATCGCGGC GGCTTCTTGG ATTATCCTAG CGACAGCAAG AGCGGCCTAT AACATGGTCA AGTCGAAAGA AGGTGATATC AGCATCAGCC GTATGGGCCG TAGTCAGCTG GGCATGATCT TCGCGCATCT TGGTATTGCT GTGTCTGTGA TTGGTGCCAC TATGGTGTCG AATTACTCGA TTGAGAAAAG TGTTCGCATG GGACCTGGTA TTAGCCAAGA ACTTGCGGGT TACACCTTTA AGTATCTCGA GACCAAAAAC GTAGTGGGTC CTAACTACAC TGCAATGCAG GGACAGATAG AAGTCTACAA AGGTGATGAG CTGCTGACAT TACTCAAGCC CGATCGTCGT CAATATAATG TGCGTACTAT GGACATGACA GAAGCGGGTA TCGACTGGGG TCTATTCCGT GATTTGTATG TGACCATGGG CGATCCAATT ACCAGCACTG AATTTGCGGT TCGTTTGAAC TACAAGCCGT TCGTGCGTTG GTTATGGTTT GGGGCAATTT TCATGATGAT TGGTGGATTC TTCGCGGCAT CGGATAAACG TTACCGTGCG AAAGTCACTG CAGCCATCGC GCCTTCGGCC GAAAAGGCAA AATTGGCAAC GGCTCAATAA
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Protein sequence | MIPELGHFAL IIGVAFAFLL ISVPLIGVAR KDQYLVRYAW PLTYGMFFFI TVSVIVLAYS FAVDDFSVAY VAHHSNSQLP IFFKISAVWG GHEGSLLFWV FALSTWAAAV ALFSKGLEEV FTARVLAVLA LIVIGFSLFM LLTSSPFERL FPIPAEGRDL NPMLQDVGLI FHPPMLYLGY VGFSVSFAFA IAALMSGRLD SAWARWTRPW TLAAWIFLTG GIALGSWWAY YELGWGGWWF WDPVENASFM PWLVGTALVH SLIVTEKRGA FRNWTVLLSI FAFSLSLLGT FIVRSGVLTS VHSFAADPSR GMFILLLLGL AIGGSLTLFA FRASEMSSPA RFELKSKETM LLVCNVLLTV AAGTVLLGTL YPLLIDALGM GKISVGPPYF NAVFVPIVLV LFGFMGIGPI IRWKKSKAGE LRRQLLIPAM VAAAIGIVTP FIVDGVFNIW VAFGIAAASW IILATARAAY NMVKSKEGDI SISRMGRSQL GMIFAHLGIA VSVIGATMVS NYSIEKSVRM GPGISQELAG YTFKYLETKN VVGPNYTAMQ GQIEVYKGDE LLTLLKPDRR QYNVRTMDMT EAGIDWGLFR DLYVTMGDPI TSTEFAVRLN YKPFVRWLWF GAIFMMIGGF FAASDKRYRA KVTAAIAPSA EKAKLATAQ
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