Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0215 |
Symbol | rplF |
ID | 5751921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 256339 |
End bp | 256872 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641286470 |
Product | 50S ribosomal protein L6 |
Protein accession | YP_001552657 |
Protein GI | 160873341 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000103444 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000114271 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTCGTG TAGCAAAAGC ACCAGTATCT ATTCCAGCTG GCGTAGAGGT GACCTTGAAC GAACAGACCC TTACCGTCAA AGGCGGAAAA GGTAGTCTGA CTCGAGTGAT CAACAATGCG GTCAATGTTG TTATTGAAGC TGGCGTAGTT AAGTTCCTCC CTGTTGAAGG CGTTTCTAAC GCTTGGGCAC AGGCTGGTAC AACTCGTGCA TTAGTAAACA ACATGGTTGT TGGTGTATCT CAAGGTTTTG AGCGTAAATT AAAGTTAGTT GGCGTTGGTT ACCGTGCGAA ACTCGTCGGT TCTGACATTG ACCTTACTTT AGGTTTCTCT CATCCGTTAG TACACAAACT GCCCGCAGGC GTTACTGCAG AGTGCCCTAG CCAAACTGAC ATCGTCCTAC GTGGCGTTGA TAAACAGTTA ATTGGCCAAG TCGCTGCTGA GATTCGCGGA TACCGTCCAC CAGAGCCATA TAAAGGCAAG GGTGTTCGCT ATGACGACGA AGTAGTACGC CGTAAAGAGG CTAAGAAGAA GTAG
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Protein sequence | MSRVAKAPVS IPAGVEVTLN EQTLTVKGGK GSLTRVINNA VNVVIEAGVV KFLPVEGVSN AWAQAGTTRA LVNNMVVGVS QGFERKLKLV GVGYRAKLVG SDIDLTLGFS HPLVHKLPAG VTAECPSQTD IVLRGVDKQL IGQVAAEIRG YRPPEPYKGK GVRYDDEVVR RKEAKKK
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