Gene Sbal195_0182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_0182 
Symbol 
ID5751879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp220440 
End bp220904 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content42% 
IMG OID641286428 
ProductRNP-1 like RNA-binding protein 
Protein accessionYP_001552624 
Protein GI160873308 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000432928 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00837192 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAAAGT CATTTCTTAT TGTTTTGATT GTCGCCATTG TTGGCGCCTT TGTGCTATTT 
CAGTTTGCAC CTACGCTGCC GGCTTATATT GCCTTCGTTG CAGGCGTTAT TGTGACTAGC
CTTATCTTTA AACTTGTTCC AGAGACTTCA TCATCTCATG CTACAGAAGA ACAATATGTT
GGTCCTACTA TGACCTTATA TGTAGGTAAC CTGCCTTATC GTGTCCATGA AGGTGAAGTA
AAAGTATTGT TTGGTGAGTT TGGCCCAGTA AACTCTGTGC GTTTAGTCAG AGATCGTAAG
ACTGGTCGTC GTAAAGGTTT TGGTTTTGTG GAGATGTCAG AGTCTGGCGC TCAGAAAGCC
ATGGTTAAAC TGAATGACTA TAGCTTCCAA GAAAGAACCT TAAAAGTAAG AGAAGCAAAA
ACACAAGATT CGGAAGCTGC CGACCGTACT GGTACTGACG AGTAG
 
Protein sequence
MQKSFLIVLI VAIVGAFVLF QFAPTLPAYI AFVAGVIVTS LIFKLVPETS SSHATEEQYV 
GPTMTLYVGN LPYRVHEGEV KVLFGEFGPV NSVRLVRDRK TGRRKGFGFV EMSESGAQKA
MVKLNDYSFQ ERTLKVREAK TQDSEAADRT GTDE