Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0182 |
Symbol | |
ID | 5751879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 220440 |
End bp | 220904 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641286428 |
Product | RNP-1 like RNA-binding protein |
Protein accession | YP_001552624 |
Protein GI | 160873308 |
COG category | [R] General function prediction only |
COG ID | [COG0724] RNA-binding proteins (RRM domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000432928 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00837192 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAAAAGT CATTTCTTAT TGTTTTGATT GTCGCCATTG TTGGCGCCTT TGTGCTATTT CAGTTTGCAC CTACGCTGCC GGCTTATATT GCCTTCGTTG CAGGCGTTAT TGTGACTAGC CTTATCTTTA AACTTGTTCC AGAGACTTCA TCATCTCATG CTACAGAAGA ACAATATGTT GGTCCTACTA TGACCTTATA TGTAGGTAAC CTGCCTTATC GTGTCCATGA AGGTGAAGTA AAAGTATTGT TTGGTGAGTT TGGCCCAGTA AACTCTGTGC GTTTAGTCAG AGATCGTAAG ACTGGTCGTC GTAAAGGTTT TGGTTTTGTG GAGATGTCAG AGTCTGGCGC TCAGAAAGCC ATGGTTAAAC TGAATGACTA TAGCTTCCAA GAAAGAACCT TAAAAGTAAG AGAAGCAAAA ACACAAGATT CGGAAGCTGC CGACCGTACT GGTACTGACG AGTAG
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Protein sequence | MQKSFLIVLI VAIVGAFVLF QFAPTLPAYI AFVAGVIVTS LIFKLVPETS SSHATEEQYV GPTMTLYVGN LPYRVHEGEV KVLFGEFGPV NSVRLVRDRK TGRRKGFGFV EMSESGAQKA MVKLNDYSFQ ERTLKVREAK TQDSEAADRT GTDE
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