| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0160 |
|---|
| Symbol | |
|---|
| ID | 5751857 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 188272 |
|---|
| End bp | 189270 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641286406 |
|---|
| Product | general secretion pathway protein K |
|---|
| Protein accession | YP_001552602 |
|---|
| Protein GI | 160873286 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3156] Type II secretory pathway, component PulK |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0623809 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAACCC AATCTCGGTC TAAACAGCGC GGCGTTGCAC TGATCGTCGT GCTCTTGATT
GTGGCTATGG TGGTGATCAT CGCGACAAAC ATCACTGGCC GTAATCAGTT ATCTATGCGC
CGAACCTTAA ACTTGGCCCA GTACGATCAA GCTTATTGGT ATGCAATTTC CGCCGAAGAA
CTGGCGAAGA AGATTTTAAA ACAAGATTTA GATGACTCTG AAGGTCGAGT CCACAGGCAA
CAATATTGGG CCATGGCCGA TGTGGTGTTT CCTGCTGAAT ACGGTGAAAT CGCGGGCAAG
ATCACCGATA TGCGTGCCTG TTTTAACTTA AATGCCTTAT CCGCGACCAC GAAAGAGGTA
GAAAACGGTC AACCTAAGCT GCCCTTGGCG GCGAAGCAAT ATAAGGCTTT ATTGGTGAGT
TTAGGGATGG ACGACTTTAG TGCGGATCGC CTGACTCAGA CCTTAAAGGA TTATATCGAC
GAAGACATGA CGGCCAGCCC CTACGGCGCC GAAGATGCTG AATATGAATC GCGTAATGTG
CCTTACCGTG CGGCCAATAC GCTGATGAAT CATCGCAGTG AGTTACGCGC TGTGATGGGA
TACACCCAAG ATATCTATCT GAAACTCTTG CCCTATGTTT GTGTGATCCC AGGCAATGAT
AGGCAATTGC TTAACGTGAA TACTGTGGAA GTTGAGCAAG CGGCGCTGTT AGCTGGCATG
CTCGATAATC AGATTTCGGT CGGCGAAGCA GAAAGTATCA TCAACCAACG CCCCGGCGAT
GGTTTTGACA AAATCGAAGA TTTTTATGAA AGCTCATCTA TGGGCTCGAT CAAGTGGGAA
GGTGCCATGA AGTCGAGTTT TGTCATCGAT AGCCAATATT TTCTGTTGGC CTCGGGGGCG
AAAGTCGATA ACGCCGTGTT TAGAATGGAA AGCGTGCTCA AAAAGGGCGG CGGCAACAAA
ATGGAAGTGC TCACCCGTCA GTTTGGTGGC CAAAAATAA
|
|---|
| Protein sequence | MRTQSRSKQR GVALIVVLLI VAMVVIIATN ITGRNQLSMR RTLNLAQYDQ AYWYAISAEE
LAKKILKQDL DDSEGRVHRQ QYWAMADVVF PAEYGEIAGK ITDMRACFNL NALSATTKEV
ENGQPKLPLA AKQYKALLVS LGMDDFSADR LTQTLKDYID EDMTASPYGA EDAEYESRNV
PYRAANTLMN HRSELRAVMG YTQDIYLKLL PYVCVIPGND RQLLNVNTVE VEQAALLAGM
LDNQISVGEA ESIINQRPGD GFDKIEDFYE SSSMGSIKWE GAMKSSFVID SQYFLLASGA
KVDNAVFRME SVLKKGGGNK MEVLTRQFGG QK
|
|---|
| |