Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0086 |
Symbol | |
ID | 5751782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 105260 |
End bp | 105712 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641286331 |
Product | thioesterase superfamily protein |
Protein accession | YP_001552528 |
Protein GI | 160873212 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCAAACA CACTGGAAAA CACAATGGAA AAGTTTCTCG CACAGCACCC TATAGTGACC GAAATCCCCG TGGCTTGGGG CGAAATGGAT GCGTTGCAAC ACGTCAACAA CGTCGTCTAT TTCCGTTATT TTGAAACGGC CCGTATCGAC TTTTTCAATC GCCTTTTCCC GCTGGATACC CTGTATAAAT CAGGTATTGG CCCAGTGATC AGCGAAAATC AGGCCCGCTA TAAACGCCCA GTGACCTTCC CCGATACTCT ATTAGTGAGT GTCAGCATTA GCGATATTCA CAGCGATAGA TTTACCATGC ATTATCAGGC TTTCAGTAAA CAGCAGCAGG CAGTAACCAC CTTAGGTACT TCAGTCGCCG TGATGTTTAA CTTTAAAACC GGCAAAAAGG CCGACTTACC GGCAGAACTG CTGGCGATTC TCAAACAGCA CGAACTCGCC TAA
|
Protein sequence | MPNTLENTME KFLAQHPIVT EIPVAWGEMD ALQHVNNVVY FRYFETARID FFNRLFPLDT LYKSGIGPVI SENQARYKRP VTFPDTLLVS VSISDIHSDR FTMHYQAFSK QQQAVTTLGT SVAVMFNFKT GKKADLPAEL LAILKQHELA
|
| |