Gene Sbal195_0054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_0054 
Symbol 
ID5751750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp62524 
End bp63885 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content50% 
IMG OID641286299 
ProductTrkH family potassium uptake protein 
Protein accessionYP_001552496 
Protein GI160873180 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0168] Trk-type K+ transport systems, membrane components 
TIGRFAM ID[TIGR00933] potassium uptake protein, TrkH family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.22698e-05 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGGTTCAAT GGCATCCTTC GCTCACCCTA GAGCCCCCCC CTAAAACCGG CAAAAAACTC 
TTTGGCGCGC CGCCCTTTAT CTTAAGTGCA AGCTTTGCTC TGTTAATCCT CGTCGGCACA
TGTTTACTTA AACTGCCCAT CGCCACTGTG TCGCCCATTA CTTGGCTGCA AAGCCTGTTT
ACCGTCACCT CGGCGGTGAC AGTAACAGGG CTTGTGGTCG TCGATACTGG AAGTGTGTTC
ACGCCCTTTG GCCAAGCGAT AATCGCGCTG TTAATTCAAT GCGGGGGTTT AGGCTTGATG
ACCTTTGCGA TTGTCACCCT TATCGCCCTT GGCGGTAAGA TTGGCTTTCT ACAGCAAACC
GTCGCAAAAG AGGCGTTTAA TCAAACCGAT ACATCGACAT TAGTCTCGAC CGCCAAAGCC
GTATTTGTGT TTTCGCTGCT GGTTGAAGCC GTAGGCATGC TGATTCTATC TGTCTACTGG
AGCAGCGAGC TGGGCTGGCA AACCAGCTTA TTCCACGGTT TTTTCTATAC CATTAGCGCC
TTTAATAACG CGGGTTTTGC CCTAAGCCCA GATAGCCTAA TGCCCTATGT GGCCGATCCC
GTGATCAACC TAACCATCAC AGGTTTATTT ATCATTGGTG GTTTAGGATT TTCGGTGTGG
ATAGATCTGC GTAGGAACAA ACGTTGGTCA AAACTCAGCG TTTACAGCCG CATGATGATC
ACCGGCACTA TTGTCATCAA CGCGGTCGCC GTGATTGCGA TTTACTTTAT TGAGTACAAC
AACCCCAACA CCTTGGCGCC CTTAAGTGAA CTCGGCAAAT GGTTAGCCTC ATGGTTTCAA
GCCGTTACAC CGCGCACCGC AGGCTTTAAT ACCCTAGCGA TTGACCAACT CGAAGACGCC
AGTACCTTGC TCATACTCGT GCTGATGTTT ATCGGCGGCG GCTCATTAAG TACCGCCAGC
GGCATTAAAG TCGTCACCTT TATGGTACTG ATTTTGGCCA CTTATGGTTA TTTACGTCGC
GACGAAGCCA TCTATGTGTT TAAACGGGAA ATCCCCAAAG ATACCGTCAG CAAAGCCTTA
GCGCTGACCA TCATCTCTCT GGTCGTATCT TGGCTGGCCA TCTTCATACT GGTATTAAGT
GAGAAAGCGC CGTTAATCGA TATCGTTTTC GAGGCCATAT CCGCACTGGG CACTGTCGGT
TTGTCCCGAG GTTTAACAGG TAACTTAACC ACTCTAGGCC AAGCCATCAT CATCTTTATG
ATGTTCATGG GTCGCCTCGG CCCACTCATG CTCGCCTACT TCCTCGCGAA TCCAAGGGTG
AAAAAACTGC GCTACGCAGA AACCAAACTG GCGATTGGTT AA
 
Protein sequence
MVQWHPSLTL EPPPKTGKKL FGAPPFILSA SFALLILVGT CLLKLPIATV SPITWLQSLF 
TVTSAVTVTG LVVVDTGSVF TPFGQAIIAL LIQCGGLGLM TFAIVTLIAL GGKIGFLQQT
VAKEAFNQTD TSTLVSTAKA VFVFSLLVEA VGMLILSVYW SSELGWQTSL FHGFFYTISA
FNNAGFALSP DSLMPYVADP VINLTITGLF IIGGLGFSVW IDLRRNKRWS KLSVYSRMMI
TGTIVINAVA VIAIYFIEYN NPNTLAPLSE LGKWLASWFQ AVTPRTAGFN TLAIDQLEDA
STLLILVLMF IGGGSLSTAS GIKVVTFMVL ILATYGYLRR DEAIYVFKRE IPKDTVSKAL
ALTIISLVVS WLAIFILVLS EKAPLIDIVF EAISALGTVG LSRGLTGNLT TLGQAIIIFM
MFMGRLGPLM LAYFLANPRV KKLRYAETKL AIG