Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0039 |
Symbol | aroE |
ID | 5751731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 42483 |
End bp | 43331 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641286280 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_001552481 |
Protein GI | 160873165 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000317979 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000011065 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGACAGACA GATACGCAGT GTTTGGCAAT CCAATTAGCC ACAGTAAATC GCCGTTCATC CATGGACAAT TTGCCGCGCC CACCCAAGAG TCATTAACCT ATGAAGCTAT TCTTGCTCCG GTCGATGGTT TTGAAGCCTC ATTGACGGCG TTTTTCAATG CGGGCGGCAA GGGCGCCAAT GTGACAGTGC CTTTTAAGGA GCAAGCTTTT GCGCTGTGTG ACAGTATCAG CCCCGAAGCC AAACTCGCTG GCGCAGTCAA CACCTTAAGT TTATTGGCCG ATGGAACTAT TCGCGGTGAT AACACCGACG GCTTAGGGCT GGTGGCCGAT CTCATCGCTA ACTTAGGTAG CTTGCAAGAT CAGCGCGTGT TACTCATTGG CGCTGGTGGC GCGGCGCGCG GTTGTATTCT GCCGTTATTA AATGCGGAGA TTGCACAACT GACCATCAGC AATCGCACCC ACACTAAGGC GCAGCTTTTG GTCGATATCT TTACTTCTGT AGATAACGGC GCTTACGCGA GTAAAGTCAC CGCCGTAGAA ATGAGTGAGC TTGCGGGCGA GTTCGATATC ATTATTAATT CAACCTCTGC TAGCCTTGCG GGCGAGTTGC CACCTTTGCC AGCACATATC ATCACCACCC AAACCGTTTG TTATGACATG ATGTATGGCG CCTCGGTCAC CGCGTTTAAC CAATGGGCAC TCTCCCAAGG TGCGGCGAAA GCCATTGATG GGCTAGGTAT GTTAGTCGGA CAAGCGGCTA AGAGTTTTAC CCTATGGCGA GGTGTTGAGC CCGACACCCA AGTGGTGTTG ACGCTTTTGC GGGACAAACT AATGGCAGAG CCTAAGTAG
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Protein sequence | MTDRYAVFGN PISHSKSPFI HGQFAAPTQE SLTYEAILAP VDGFEASLTA FFNAGGKGAN VTVPFKEQAF ALCDSISPEA KLAGAVNTLS LLADGTIRGD NTDGLGLVAD LIANLGSLQD QRVLLIGAGG AARGCILPLL NAEIAQLTIS NRTHTKAQLL VDIFTSVDNG AYASKVTAVE MSELAGEFDI IINSTSASLA GELPPLPAHI ITTQTVCYDM MYGASVTAFN QWALSQGAAK AIDGLGMLVG QAAKSFTLWR GVEPDTQVVL TLLRDKLMAE PK
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