Gene Sbal195_0023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_0023 
Symbol 
ID5751715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp27883 
End bp29340 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content48% 
IMG OID641286264 
ProductTrkH family potassium uptake protein 
Protein accessionYP_001552465 
Protein GI160873149 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0168] Trk-type K+ transport systems, membrane components 
TIGRFAM ID[TIGR00933] potassium uptake protein, TrkH family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.211854 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0148489 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATATA AAACCATAAT ACGAATCATA GGCCTGCTGA TTGGTTTATT TTCAATCACT 
ATGCTGCCAC CAGCACTGAT CGCAGTTTGG TATAACGATG GCGGCGGTAC GGCGTTTATG
CAGGCATTTT TTGTCAGCCT ATTTATTGGT TTCTGGCTCT GGTATCCCAA TCGCCACTGT
AAAGAAGAAT TGCGTACCCG AGAGGGTTTC TTGATTGTGG TCCTGTTCTG GACCGTACTG
GGTTCTATCG GTGCTTTACC GTTTATCTTC TCGAGTCAAC CCGACCTCAG CTGGACCGAT
AGTTTCTTCG AATCTTTCTC TGCGTTAACC ACCACCGGAG CCACAGTGAT TGTCGGGCTC
GACTTCTTAC CTAAAGCCAT TCTGTTTTAT CGCCATATGC TGCAATGGCT CGGCGGTATG
GGGATTATTG TGCTCGCCGT GGCGATTTTA CCTGTGCTTG GCGTAGGGGG AATGCAGCTC
TATCGCGCTG AAATTCCGGG CCCAGTGAAA GACAGTAAGA TGACCCCGCG GATCGCCGAA
ACCGCTAAGG CACTGTGGTA TATCTATTTA TTGCTAACTA TTTCCTGTGC GACCGCTTAT
TGGCTGGCGG GCATGAGTGT GTTCGATGCG GTTTGCCATT CATTTTCAAC TATCGCTATT
GGCGGTTTTT CGACCCACGA TGCTAGCATG GGGTATTTCG ATAGTTCTGT GATTAACCTT
ATTTGTGTGT TCTTTTTAAT CGTTTCTGCG GTTAACTTTA GCGTGCATTT TGCAGCATTT
TCGCGGCGAG GGATTAACGT TAGAGTGTAT TTTAAAGATG CTGAATTTAA GATGCTGGTG
GCGATTCAAC TCATTCTTAC CGCGATTTGT TTCCTCACGC TTTATCATTC GGGCATTTAT
GATTCGCCGG AAGAAACCTT AGACCATGCC TTATTTCAGG CGGTTTCCGT GGCCACTACC
GCAGGGTTTG GTACTGAAAG CTTCCACATG TGGCCGCTGT TTTTACCTAT TCTATTGATA
TTTTCGAGCT TTATCGGTGG CTGTGGTGGC TCAACGGCGG GCGGGATTAA AGTGATTCGG
GTCATTTTGC TGCTGTTACA GGGCTCGCGT GAATTAAAGC GACTGGTTCA TCCTAAGGCG
ATGTTCTCTA TCCGTATCGG TTCTAAAGCC TTGCCCGATC GCGTTGTCGA TGCCGTGTGG
GGATTCTTCT CTGCCTATGC GCTGGTGTTT GTGATCTGTA TGCTTGCACT CATGGCGATG
GGATTAGATG ATATTACTGC CTTTAGTGCC ACCGCAGCTT GCTTAAACAA CCTAGGCCCA
GGCTTAGGTG CGGTAGCCAG TAACTACGCC AGTATTGGCG ATGGCGCCAA ATGGGTATTG
GTCGCGGCTA TGCTGTTTGG TCGCCTCGAA GTATTTACCT TACTGATTTT GTTTACGCCA
ACTTTTTGGA AGAATTAA
 
Protein sequence
MQYKTIIRII GLLIGLFSIT MLPPALIAVW YNDGGGTAFM QAFFVSLFIG FWLWYPNRHC 
KEELRTREGF LIVVLFWTVL GSIGALPFIF SSQPDLSWTD SFFESFSALT TTGATVIVGL
DFLPKAILFY RHMLQWLGGM GIIVLAVAIL PVLGVGGMQL YRAEIPGPVK DSKMTPRIAE
TAKALWYIYL LLTISCATAY WLAGMSVFDA VCHSFSTIAI GGFSTHDASM GYFDSSVINL
ICVFFLIVSA VNFSVHFAAF SRRGINVRVY FKDAEFKMLV AIQLILTAIC FLTLYHSGIY
DSPEETLDHA LFQAVSVATT AGFGTESFHM WPLFLPILLI FSSFIGGCGG STAGGIKVIR
VILLLLQGSR ELKRLVHPKA MFSIRIGSKA LPDRVVDAVW GFFSAYALVF VICMLALMAM
GLDDITAFSA TAACLNNLGP GLGAVASNYA SIGDGAKWVL VAAMLFGRLE VFTLLILFTP
TFWKN