Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0011 |
Symbol | |
ID | 5751703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 11214 |
End bp | 12254 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641286252 |
Product | putative signal transduction protein |
Protein accession | YP_001552453 |
Protein GI | 160873137 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1639] Predicted signal transduction protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0123691 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGATTAAAT CACTTTTTAA TAAGCTCTTT AATATTCGCG ATACAGCGAC GGTTGAGAGG CCCAAAAGTT TTTCAACCAC TGACTTAGGT AAGTCGCTTG AACCTGCGCG AAAGCCAGCT AAACCTCTCG AAGACATTAG TGTGGTATCT GTGGATTTAG CCGCACTCTT TTATAGTTTG TTGTTTCCAA CACGGGTTAA GGACACTGGC GGTGTAGCTA ATAATCTTGA ACGTCGAGTC ATGGCGGAGA TAGAGCAGGC ATTGGCATCG CCACAAGTGA TCGCCGAAAA AGTGCTAAAG CTACCGTCAA AGGTATTGGA GCTAGATCGT AAGCTGGCCG ATCCTCAGTT TGATATAAAG GATCTATTAG CGCTTATTGA GCGAGATCCT TTACTGAGTA TTGAGGTACT TAAGCTATGT AACTCCCCTG CGTTTAAACG TAGCGATAAG GATATCACCA GTTTACAACA GGCTTTGGTA CAGCTTGGTC GTGAACAGTT AAGAAAGTTT GTCACCACTT GTCTAGTGCG TGAAATGTTG GATATCAAGC CAATTTATTT TCGTCGTTTC GGCGCTGAAA TTTGGCGCCA CTCGATGCAG GTCGCCTTTC TCGCCAGTGA GTTAAGCGAT GAAGATCAAG ATACGGCTTT TTTATTGGGC TTATTGCATG ATGTCGGCAA GCTGGCCATT TTCAAAATGC TACTCGATGC GTTTGTGCAG GCGGAGCCGG GAGAACAGCC TAATTCTGGG TTATTTAGAC AAGTGATGAC GACGAAATCG TTAACCTTAA GTTCATTGCT CGCTAAGTAT TGGCAGCTAC CCAATACCTT TGAAACAGAA TTAGACAAGC TCGCCAGTGT GAACTCGCGC CCGCAAGCTG GGCTCGCCGC TGTGATATGG CGGACGAATG TGATCAGCGA GATTTCTATG CTGCATCAAG CAGGGCAATT GTCTCCTGAA ATACTGGCGA ATTTACTGCA GCAAGTTAAC TTAGATCAAA CTCAATTTGA TGGCTTACAT CAAAAACTGA CGCAGTTCTG A
|
Protein sequence | MIKSLFNKLF NIRDTATVER PKSFSTTDLG KSLEPARKPA KPLEDISVVS VDLAALFYSL LFPTRVKDTG GVANNLERRV MAEIEQALAS PQVIAEKVLK LPSKVLELDR KLADPQFDIK DLLALIERDP LLSIEVLKLC NSPAFKRSDK DITSLQQALV QLGREQLRKF VTTCLVREML DIKPIYFRRF GAEIWRHSMQ VAFLASELSD EDQDTAFLLG LLHDVGKLAI FKMLLDAFVQ AEPGEQPNSG LFRQVMTTKS LTLSSLLAKY WQLPNTFETE LDKLASVNSR PQAGLAAVIW RTNVISEISM LHQAGQLSPE ILANLLQQVN LDQTQFDGLH QKLTQF
|
| |