Gene Sbal195_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_0004 
Symbol 
ID5751696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp4191 
End bp6608 
Gene Length2418 bp 
Protein Length805 aa 
Translation table11 
GC content47% 
IMG OID641286245 
ProductDNA gyrase, B subunit 
Protein accessionYP_001552446 
Protein GI160873130 
COG category[L] Replication, recombination and repair 
COG ID[COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 
TIGRFAM ID[TIGR01059] DNA gyrase, B subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.801274 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00617019 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAGAGA ATAGTTACGA TTCTTCGAGT ATTAAGGTCC TTAAGGGCCT TGATGCAGTA 
CGTAAGAGAC CTGGGATGTA TATTGGTGAC ACCGACGACG GTACGGGTCT ACATCATATG
GTGTTCGAAG TAGTCGATAA CTCTATCGAT GAAGCCTTAG CCGGCCACTG CAGCGATATT
ACCATTACTA TCCATGTCGA TGGTTCGGTT TCTGTTAAGG ATGACGGCCG TGGTATTCCG
GTCTCTATCC ATGAGGAAGA AGGCGTATCG GCAGCAGAAG TTATCATGAC GGTATTGCAT
GCCGGCGGTA AGTTCGACGA TAACTCCTAT AAAGTGTCTG GCGGTCTCCA CGGTGTGGGT
GTATCGGTTG TAAACGCTTT ATCTAAAAAG CTGCAAATGA CCATTCGTCG TGCTGGCAAA
GTGTACGAGC AGTTTTATAC TCACGGTGTG CCTGATGCGC CAATCAAAGA GATTGGTGAT
GCGACTAAAA CCGGTACCGA GATCCGTTTT TGGCCAAGTG AAGATACCTT TAGCGATGTC
GAGTTTCACT TTGAAATTTT GGCAAAGCGC GTGCGCGAAC TGTCATTCCT TAACTCAGGC
GTAGGTATTC GTCTGGTTGA TGAACGTGAC AACAAGAATG AATTCTTTAA ATACGAAGGC
GGTATTAGCG CATTCGTAGA TTATTTGAAC CGTAATAAAA CCCCCGTCAA CAAAGACGTA
TTCCACTTTA TGCAAGAGCG TGAAGATGGC ATTACCGTTG AAGTGGCTAT GCAGTGGAAT
GACGGTTATC AAGAAAATAT TTTCTGTTTT ACCAACAACA TTCCACAGCG TGATGGTGGT
ACTCACTTAG TCGGTTTCCG TAGTGCGTTG ACACGTAACC TCAACAGCTA CATGGAAAAC
GAAGGCTATA ACAAGAAAGG CAAAACTAGC GCGACTGGCG ACGATGCCCG TGAAGGTTTG
ACTGCCGTTA TCTCTGTTAA AGTGCCTGAT CCTAAGTTCA GCTCGCAAAC CAAAGATAAA
CTGGTTTCTA GTGAAGTGAA AACCGCGGTT GAACAAACCA TGGGTGAGAA GCTGAACGAT
TATCTACTGG AAAACCCAGC CGATGCGAAG TTGATTGTTG GTAAGATTGT CGATGCGGCC
CGTGCCCGTG AAGCGGCGCG TAAAGCCCGT GAAATGACCC GTCGTAAAGG CGCACTCGAT
TTAGGTGGTT TGCCAGGTAA GCTGGCCGAT TGCCAAGAAA AAGATCCCGG TCTTTCAGAA
ATTTACATAG TGGAAGGTGA CTCTGCTGGC GGTAGCGCTA AGCAGGGACG TAACCGTAAG
AACCAAGCGA TTCTGCCACT GAAAGGTAAA ATTCTAAACG TTGAGAAAGC CCGCTTCGAT
AAGATGTTGT CTTCTCAAGA AGTGGCCACA CTGATCACGG CGCTCGGCTG TGGTATTGGT
CGCGACGAAT ATAACCCAGA TAAAACTCGT TATCACAACA TCATCATCAT GACGGATGCT
GACGTCGACG GCTCGCACAT TCGTACCTTG CTGTTGACCT TCTTCTTCCG TCAAATGCCT
GAATTGATTG AACGTGGTTA TGTGTATATT GCTCAGCCAC CACTATTTAA AGTGAAAAAG
GGCAAGCAAG AACAGTATTT GAAAGACGAG CCTGCATTGA CTCAATATCT CACGACTCAA
GCATTGGATG GCACTATTGT GTACCCAACC CAAGGTGCGA TTGGTATGTC AGGTGAGCCG
TTAGAGCGTT TAGTGACTCA GTATCGTGAA GTGGAAGCCA TTGTTGCCCG TTTAGAGCAG
CGCTATCCAA CGCACATTAC TAACCGTATG CTTTACCACC CAATGATCAC CAACGAGATG
TTGGCCGATG AAGGCAAGAT GAAAGAGTGG ATCGATGCCT TTATCCATGA GCTGGTGGAA
ATGGAAAGCA GCGGCGTACT GTATTCTGCT GAGCCGATTC TCGATCCTGA GCGTAAAGTG
TATCTGCCTA AGATCACCAT TCGTAAACAC GGTATCGATA CTAACTATCT GTTTACTTAT
GACTTCTTCC AATCAAGCGA TTATCAACGT ATCGGTAAGT TAGGTGCGGC GTTAGATGGC
ATGATTGAAG AGGGCGGCTA TGTACAACGC GGTGAACGTG TTAAAGAAGT CGGTAGCTTC
CTTGAAGCGC TAGATTGGAC GATTTCTGAA GCGAAACGCG GCTTATACAT TCAACGTTAT
AAAGGATTGG GTGAGATGAA CCCTGAGCAA TTGTGGGAAA CTACAATGGA TCCTGAATCA
CGCCGTATGT TGCAAGTCAC GATTGATGAT GCCGTGGGTG CCGATCAGTT GTTCACTTGT
TTGATGGGTG ATCAAGTTGA ACCTCGTCGT GAGTTCATCG AAGCGAACGC ATTGAACGTG
GCTAACTTAG ACGTATAG
 
Protein sequence
MSENSYDSSS IKVLKGLDAV RKRPGMYIGD TDDGTGLHHM VFEVVDNSID EALAGHCSDI 
TITIHVDGSV SVKDDGRGIP VSIHEEEGVS AAEVIMTVLH AGGKFDDNSY KVSGGLHGVG
VSVVNALSKK LQMTIRRAGK VYEQFYTHGV PDAPIKEIGD ATKTGTEIRF WPSEDTFSDV
EFHFEILAKR VRELSFLNSG VGIRLVDERD NKNEFFKYEG GISAFVDYLN RNKTPVNKDV
FHFMQEREDG ITVEVAMQWN DGYQENIFCF TNNIPQRDGG THLVGFRSAL TRNLNSYMEN
EGYNKKGKTS ATGDDAREGL TAVISVKVPD PKFSSQTKDK LVSSEVKTAV EQTMGEKLND
YLLENPADAK LIVGKIVDAA RAREAARKAR EMTRRKGALD LGGLPGKLAD CQEKDPGLSE
IYIVEGDSAG GSAKQGRNRK NQAILPLKGK ILNVEKARFD KMLSSQEVAT LITALGCGIG
RDEYNPDKTR YHNIIIMTDA DVDGSHIRTL LLTFFFRQMP ELIERGYVYI AQPPLFKVKK
GKQEQYLKDE PALTQYLTTQ ALDGTIVYPT QGAIGMSGEP LERLVTQYRE VEAIVARLEQ
RYPTHITNRM LYHPMITNEM LADEGKMKEW IDAFIHELVE MESSGVLYSA EPILDPERKV
YLPKITIRKH GIDTNYLFTY DFFQSSDYQR IGKLGAALDG MIEEGGYVQR GERVKEVGSF
LEALDWTISE AKRGLYIQRY KGLGEMNPEQ LWETTMDPES RRMLQVTIDD AVGADQLFTC
LMGDQVEPRR EFIEANALNV ANLDV