Gene P9211_18411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_18411 
SymbolaroE 
ID5731729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp1673837 
End bp1674739 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content35% 
IMG OID641286228 
Productshikimate / quinate 5-dehydrogenase 
Protein accessionYP_001551726 
Protein GI159904382 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0169] Shikimate 5-dehydrogenase 
TIGRFAM ID[TIGR00507] shikimate 5-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.611208 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAA CAAAATTTAG CTCCATTACT GGAAAAACAA GCCTTGTGGG GGTTATTGGG 
GATCCCATTT CCCATTCTCT TTCACCAGTA ATTCAAAATG CAGCACTGCA CAAAATGAAT
CTGGACTGGT GTTATCTCGC GATCCCATGT AAGCCTGACA ACCTAGAATC AATAATCAAA
TGCTTAAGTA AGATCAATTG CAAAGGTTTA AATATTACAA TTCCTCATAA AACTAATGCT
CTCAAGTTTT GTAATCATGT AAGTGAAATA GCAACCAAAG TTGGAGCAAT CAATACTTTA
ATTCCAGACA ATGATGATGG GTGGATTGGA ACAAATACTG ATGTTGAAGG GTTTTTAAAA
CCTCTTGGGT TAGAAAAGAA TTGGGAAAGC CGAAATGCAG TAATACTAGG TAATGGTGGA
AGTGCAAGAG CAGTTTTACT AGGTCTTGAA AAGTTAAAGT TGGCAGAGAT TGCTATCATT
GGCCGAAAAG AAACATCAAT AACTAATCTA ATTAATTCCC TGACTAGCCC TAATGGAAAT
ATAAAAGGCT TGACTCAAGA TAGTTTGCAA TTAAATGAAT ATATAAAGAA TGCCGATCTA
ATCATCAACA CAACTCCAAT AGGGATGCTT CAAACAAATA ATACAAGCTG TATAGATTCT
GAGATTCCTT TTGGTGAAAA GATTTGGGAC AACCTAAAAC CAAAAACTAC TCTTTATGAC
TTAATTTACA ATCCAAGACC AACAAAGTGG CTAGAAATAG GAAAAGAAAA AGGCTGTATA
CCGATTGATG GCTTAGAAAT GTTAATCCAA CAGGGAGCTG CATCCTTAAG ATTATGGAGC
GGTATCGAAG AAATTCCTAT AGATATCATG AGGAAATCAG CTAAAGATCA CCTCCTAAAT
TAA
 
Protein sequence
MKETKFSSIT GKTSLVGVIG DPISHSLSPV IQNAALHKMN LDWCYLAIPC KPDNLESIIK 
CLSKINCKGL NITIPHKTNA LKFCNHVSEI ATKVGAINTL IPDNDDGWIG TNTDVEGFLK
PLGLEKNWES RNAVILGNGG SARAVLLGLE KLKLAEIAII GRKETSITNL INSLTSPNGN
IKGLTQDSLQ LNEYIKNADL IINTTPIGML QTNNTSCIDS EIPFGEKIWD NLKPKTTLYD
LIYNPRPTKW LEIGKEKGCI PIDGLEMLIQ QGAASLRLWS GIEEIPIDIM RKSAKDHLLN