Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_17671 |
Symbol | secA |
ID | 5730981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | - |
Start bp | 1590013 |
End bp | 1592850 |
Gene Length | 2838 bp |
Protein Length | 945 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641286152 |
Product | preprotein translocase subunit SecA |
Protein accession | YP_001551652 |
Protein GI | 159904308 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAAGC TTTTGCTGGG TGACCCCAAT GCTCGAAAGC TGAAGCGCTA TCTACCTATT GTAAGCGATA TCAATCTTTT AGAAGAGGAG ATTTCTCCTT TAACAGATGA TGAGCTTCGT GCTAAAACTG CTGATTTTAG AGAGCGATTA GCAAAAGTTT CTGGATTGGA AAAACAACGG GAGCTGTTGG ATGAGATTCT TCCAGAAGTT TTTTCTGTAG TAAGAGAAGC GAGCAAGAGA GTCTTAGGGA TGCGGCATTT TGATGTCCAA TTGATTGGAG GGATGGTTTT GCATGAGGGA CAAATTGCTG AGATGAAAAC AGGAGAGGGA AAAACTTTGG TAGCAACTTT GCCTAGTTTT TTAAATGCTC TTACTGGAAG AGGAGTACAC GTTGTTACTG TTAATGACTA CTTGGCTCGT CGAGATGCAG AGTGGATGGG ACAAGTTCAT AGATTCCTTG GCTTATCTGT AGGTTTAATT CAACAGGATA TGACTCCTCT AGAAAGGCGC AAAAATTATG AATGTGATAT TACATATGCA ACTAATTCTG AGCTTGGTTT TGATTACTTA AGAGATAACA TGGCTAGTGA TATGAGTGAA ATTGTTCAAA GAAAATTTCA ATTTTGTATC ATTGACGAGG TGGATTCTAT ATTGATTGAT GAGGCAAGAA CACCTTTAAT TATTTCTGGC CAAATTGAGC GTCCACAAGA AAAATATCAA AAAGCTGCAG AAGTAGTCGC TTCTCTTATT AGAGCTGCAG AGATGGGTAA AGATGGAATC GATCCAGAAG GTGATTATGA GGTTGATGAG AAGCAAAGGA CTTGCACTTT GACAGATGAA GGGTTTGCTA GATCTGAAGA ATTGTTGAAA GTTAATGATT TATATGACCC TAAAGATCCA TGGGCTCATT ACATCACCAA TGCTTTAAAA GCTAAAGAGT TATTTGTTAA AGATGTTAAT TATATTGTTA GAAATGGTGA AGCAGTCATT GTTGATGAGT TTACTGGTAG AGTTATGCCT GGTCGAAGAT GGAGTGATGG ACAACATCAA GCAATAGAGG CTAAAGAGAA ATTAAATATT CAGTCTGAGA CACAAACTCT TGCTTCAATT ACTTATCAAA ACTTTTTCTT ATTATATCCG CGTTTAGCGG GAATGACAGG TACTGCTAAG ACTGAAGAAG TTGAATTTGA AAAAACATAT CAACTTGAGA CAACTGTAAT ACCAACAAAT CGACCTCGGT CTAGAAACGA TTGGGTTGAT CAAGTATATA AAACCGAAGC AGGTAAATGG AGAGCTGTTG CTAATGAAAC AGCGGAGGTT CATAAGAAAG GTCGACCTGT ATTAGTAGGT ACTACCAGTG TTGAGAAAAG TGAGCTACTT AGTTCTTTGT TGGCAGAAGA GCAGATACCA CATAATTTAT TAAATGCGAA GCCTGAAAAT GTAGAACGTG AGGCAGAAAT TGTTGCTCAG GCAGGAAGAG CAGGCGCAGT AACTATTGCA ACCAATATGG CAGGGAGAGG GACAGACATA ATTCTTGGTG GTAATAGTGA TTACATGGCA AGACTTAAAT TAAGAGAAGT TCTTTTGCCT AAGCTTGTTA AACCTGAAGA TGGACATAAG CCACCTGTTC CTTTACAACG ACGCAGCGAA TCATCTGGCT TTGGGGAAGA CAAAGATGTT ACTACTGATA ACAGTAAGCC TCTTAGTGCC TCTAGTGCAC TTGGCACATT ATATCCATGT GTTCTTACTG AAGATACGGA AAAAGTCCTT ATAGATTTGG AGCGTAAATT AGTTGCTGAT TGGGGAGATA GAGCATTAAC TGCAATTGAG CTAGAGGATC GAATTTCTAC CGCTGCAGAA AAAGCTCCGA CTAATGATGC ATCAATTCAA TTAATGAGAG ATGCAATTTC ATTAGTGAAG TCTGAGTATG ATGTTGTTGT TCAGAAAGAA GAAGTGCAAG TTCGTGAAGC TGGAGGACTT CATGTTATTG GTACTGAGCG TCATGAATCG CGCCGAGTAG ATAATCAATT GCGAGGCAGA GCTGGCAGGC AAGGTGATCT TGGAAGTACA AGGTTCTTTT TGTCTTTAGG TGATAATTTG CTGCGTATTT TTGGTGGAGA TAGAGTTGCT TCTTTGATGA ATGCTTTTAA AGTTGATGAA GATATGCCTA TTGAATCTGG CATGCTTACT AGGTCTTTAG AAAGTGCTCA AAAGAAGGTT GAGACTTATT ATTATGATAT AAGGAAACAA GTTTTTGAGT ATGATGAAGT AATGAATAAT CAACGTCGAG CTGTTTATTC AGAGCGTAGA CGAGTTTTAG ATGGGTTTGG GCTAAAGAAA CAAGTGATTG GTTATGGTGA AAAGACTATG GAAGAAATTG TATATGCTTA TGTCAATCCA GATTTGCCTT CTGAAGAATG GGATCTAGCT CAGTTAGTTA GTAAAGTAAA AGAGTTCGTT TATTTATTAA ATGATTTAAA ACCTGATCAG CTAGAAGGTT TAGATATTGA TGAGTTGAAA GCATTTTTAC AAGAACAATT ACGTAATGCT TATGATCTTA AAGAAGCTCA GATTGAAGAA CAAAAACCTG GCTTAATGAA AGAGGCTGAA AGATTCTTCA TTCTTCAGCA AATAGATACT TTATGGCGTG AACATTTGCA GGCGATGGAT GCTTTGAGGG AATCAGTAGG TCTTAGAGGA TATGGTCAAA AAGATCCTTT AATAGAATAT AAGAATGAGG GGTATGACAT GTTCCTAGAA ATGATGACAA ATATGCGTAG GAATGTTATT TACTCTATGT TTATGTTTCA ACCTGCACCT GAATCCGATA AGGAATAA
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Protein sequence | MLKLLLGDPN ARKLKRYLPI VSDINLLEEE ISPLTDDELR AKTADFRERL AKVSGLEKQR ELLDEILPEV FSVVREASKR VLGMRHFDVQ LIGGMVLHEG QIAEMKTGEG KTLVATLPSF LNALTGRGVH VVTVNDYLAR RDAEWMGQVH RFLGLSVGLI QQDMTPLERR KNYECDITYA TNSELGFDYL RDNMASDMSE IVQRKFQFCI IDEVDSILID EARTPLIISG QIERPQEKYQ KAAEVVASLI RAAEMGKDGI DPEGDYEVDE KQRTCTLTDE GFARSEELLK VNDLYDPKDP WAHYITNALK AKELFVKDVN YIVRNGEAVI VDEFTGRVMP GRRWSDGQHQ AIEAKEKLNI QSETQTLASI TYQNFFLLYP RLAGMTGTAK TEEVEFEKTY QLETTVIPTN RPRSRNDWVD QVYKTEAGKW RAVANETAEV HKKGRPVLVG TTSVEKSELL SSLLAEEQIP HNLLNAKPEN VEREAEIVAQ AGRAGAVTIA TNMAGRGTDI ILGGNSDYMA RLKLREVLLP KLVKPEDGHK PPVPLQRRSE SSGFGEDKDV TTDNSKPLSA SSALGTLYPC VLTEDTEKVL IDLERKLVAD WGDRALTAIE LEDRISTAAE KAPTNDASIQ LMRDAISLVK SEYDVVVQKE EVQVREAGGL HVIGTERHES RRVDNQLRGR AGRQGDLGST RFFLSLGDNL LRIFGGDRVA SLMNAFKVDE DMPIESGMLT RSLESAQKKV ETYYYDIRKQ VFEYDEVMNN QRRAVYSERR RVLDGFGLKK QVIGYGEKTM EEIVYAYVNP DLPSEEWDLA QLVSKVKEFV YLLNDLKPDQ LEGLDIDELK AFLQEQLRNA YDLKEAQIEE QKPGLMKEAE RFFILQQIDT LWREHLQAMD ALRESVGLRG YGQKDPLIEY KNEGYDMFLE MMTNMRRNVI YSMFMFQPAP ESDKE
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