Gene P9211_17671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_17671 
SymbolsecA 
ID5730981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp1590013 
End bp1592850 
Gene Length2838 bp 
Protein Length945 aa 
Translation table11 
GC content38% 
IMG OID641286152 
Productpreprotein translocase subunit SecA 
Protein accessionYP_001551652 
Protein GI159904308 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) 
TIGRFAM ID[TIGR00963] preprotein translocase, SecA subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAGC TTTTGCTGGG TGACCCCAAT GCTCGAAAGC TGAAGCGCTA TCTACCTATT 
GTAAGCGATA TCAATCTTTT AGAAGAGGAG ATTTCTCCTT TAACAGATGA TGAGCTTCGT
GCTAAAACTG CTGATTTTAG AGAGCGATTA GCAAAAGTTT CTGGATTGGA AAAACAACGG
GAGCTGTTGG ATGAGATTCT TCCAGAAGTT TTTTCTGTAG TAAGAGAAGC GAGCAAGAGA
GTCTTAGGGA TGCGGCATTT TGATGTCCAA TTGATTGGAG GGATGGTTTT GCATGAGGGA
CAAATTGCTG AGATGAAAAC AGGAGAGGGA AAAACTTTGG TAGCAACTTT GCCTAGTTTT
TTAAATGCTC TTACTGGAAG AGGAGTACAC GTTGTTACTG TTAATGACTA CTTGGCTCGT
CGAGATGCAG AGTGGATGGG ACAAGTTCAT AGATTCCTTG GCTTATCTGT AGGTTTAATT
CAACAGGATA TGACTCCTCT AGAAAGGCGC AAAAATTATG AATGTGATAT TACATATGCA
ACTAATTCTG AGCTTGGTTT TGATTACTTA AGAGATAACA TGGCTAGTGA TATGAGTGAA
ATTGTTCAAA GAAAATTTCA ATTTTGTATC ATTGACGAGG TGGATTCTAT ATTGATTGAT
GAGGCAAGAA CACCTTTAAT TATTTCTGGC CAAATTGAGC GTCCACAAGA AAAATATCAA
AAAGCTGCAG AAGTAGTCGC TTCTCTTATT AGAGCTGCAG AGATGGGTAA AGATGGAATC
GATCCAGAAG GTGATTATGA GGTTGATGAG AAGCAAAGGA CTTGCACTTT GACAGATGAA
GGGTTTGCTA GATCTGAAGA ATTGTTGAAA GTTAATGATT TATATGACCC TAAAGATCCA
TGGGCTCATT ACATCACCAA TGCTTTAAAA GCTAAAGAGT TATTTGTTAA AGATGTTAAT
TATATTGTTA GAAATGGTGA AGCAGTCATT GTTGATGAGT TTACTGGTAG AGTTATGCCT
GGTCGAAGAT GGAGTGATGG ACAACATCAA GCAATAGAGG CTAAAGAGAA ATTAAATATT
CAGTCTGAGA CACAAACTCT TGCTTCAATT ACTTATCAAA ACTTTTTCTT ATTATATCCG
CGTTTAGCGG GAATGACAGG TACTGCTAAG ACTGAAGAAG TTGAATTTGA AAAAACATAT
CAACTTGAGA CAACTGTAAT ACCAACAAAT CGACCTCGGT CTAGAAACGA TTGGGTTGAT
CAAGTATATA AAACCGAAGC AGGTAAATGG AGAGCTGTTG CTAATGAAAC AGCGGAGGTT
CATAAGAAAG GTCGACCTGT ATTAGTAGGT ACTACCAGTG TTGAGAAAAG TGAGCTACTT
AGTTCTTTGT TGGCAGAAGA GCAGATACCA CATAATTTAT TAAATGCGAA GCCTGAAAAT
GTAGAACGTG AGGCAGAAAT TGTTGCTCAG GCAGGAAGAG CAGGCGCAGT AACTATTGCA
ACCAATATGG CAGGGAGAGG GACAGACATA ATTCTTGGTG GTAATAGTGA TTACATGGCA
AGACTTAAAT TAAGAGAAGT TCTTTTGCCT AAGCTTGTTA AACCTGAAGA TGGACATAAG
CCACCTGTTC CTTTACAACG ACGCAGCGAA TCATCTGGCT TTGGGGAAGA CAAAGATGTT
ACTACTGATA ACAGTAAGCC TCTTAGTGCC TCTAGTGCAC TTGGCACATT ATATCCATGT
GTTCTTACTG AAGATACGGA AAAAGTCCTT ATAGATTTGG AGCGTAAATT AGTTGCTGAT
TGGGGAGATA GAGCATTAAC TGCAATTGAG CTAGAGGATC GAATTTCTAC CGCTGCAGAA
AAAGCTCCGA CTAATGATGC ATCAATTCAA TTAATGAGAG ATGCAATTTC ATTAGTGAAG
TCTGAGTATG ATGTTGTTGT TCAGAAAGAA GAAGTGCAAG TTCGTGAAGC TGGAGGACTT
CATGTTATTG GTACTGAGCG TCATGAATCG CGCCGAGTAG ATAATCAATT GCGAGGCAGA
GCTGGCAGGC AAGGTGATCT TGGAAGTACA AGGTTCTTTT TGTCTTTAGG TGATAATTTG
CTGCGTATTT TTGGTGGAGA TAGAGTTGCT TCTTTGATGA ATGCTTTTAA AGTTGATGAA
GATATGCCTA TTGAATCTGG CATGCTTACT AGGTCTTTAG AAAGTGCTCA AAAGAAGGTT
GAGACTTATT ATTATGATAT AAGGAAACAA GTTTTTGAGT ATGATGAAGT AATGAATAAT
CAACGTCGAG CTGTTTATTC AGAGCGTAGA CGAGTTTTAG ATGGGTTTGG GCTAAAGAAA
CAAGTGATTG GTTATGGTGA AAAGACTATG GAAGAAATTG TATATGCTTA TGTCAATCCA
GATTTGCCTT CTGAAGAATG GGATCTAGCT CAGTTAGTTA GTAAAGTAAA AGAGTTCGTT
TATTTATTAA ATGATTTAAA ACCTGATCAG CTAGAAGGTT TAGATATTGA TGAGTTGAAA
GCATTTTTAC AAGAACAATT ACGTAATGCT TATGATCTTA AAGAAGCTCA GATTGAAGAA
CAAAAACCTG GCTTAATGAA AGAGGCTGAA AGATTCTTCA TTCTTCAGCA AATAGATACT
TTATGGCGTG AACATTTGCA GGCGATGGAT GCTTTGAGGG AATCAGTAGG TCTTAGAGGA
TATGGTCAAA AAGATCCTTT AATAGAATAT AAGAATGAGG GGTATGACAT GTTCCTAGAA
ATGATGACAA ATATGCGTAG GAATGTTATT TACTCTATGT TTATGTTTCA ACCTGCACCT
GAATCCGATA AGGAATAA
 
Protein sequence
MLKLLLGDPN ARKLKRYLPI VSDINLLEEE ISPLTDDELR AKTADFRERL AKVSGLEKQR 
ELLDEILPEV FSVVREASKR VLGMRHFDVQ LIGGMVLHEG QIAEMKTGEG KTLVATLPSF
LNALTGRGVH VVTVNDYLAR RDAEWMGQVH RFLGLSVGLI QQDMTPLERR KNYECDITYA
TNSELGFDYL RDNMASDMSE IVQRKFQFCI IDEVDSILID EARTPLIISG QIERPQEKYQ
KAAEVVASLI RAAEMGKDGI DPEGDYEVDE KQRTCTLTDE GFARSEELLK VNDLYDPKDP
WAHYITNALK AKELFVKDVN YIVRNGEAVI VDEFTGRVMP GRRWSDGQHQ AIEAKEKLNI
QSETQTLASI TYQNFFLLYP RLAGMTGTAK TEEVEFEKTY QLETTVIPTN RPRSRNDWVD
QVYKTEAGKW RAVANETAEV HKKGRPVLVG TTSVEKSELL SSLLAEEQIP HNLLNAKPEN
VEREAEIVAQ AGRAGAVTIA TNMAGRGTDI ILGGNSDYMA RLKLREVLLP KLVKPEDGHK
PPVPLQRRSE SSGFGEDKDV TTDNSKPLSA SSALGTLYPC VLTEDTEKVL IDLERKLVAD
WGDRALTAIE LEDRISTAAE KAPTNDASIQ LMRDAISLVK SEYDVVVQKE EVQVREAGGL
HVIGTERHES RRVDNQLRGR AGRQGDLGST RFFLSLGDNL LRIFGGDRVA SLMNAFKVDE
DMPIESGMLT RSLESAQKKV ETYYYDIRKQ VFEYDEVMNN QRRAVYSERR RVLDGFGLKK
QVIGYGEKTM EEIVYAYVNP DLPSEEWDLA QLVSKVKEFV YLLNDLKPDQ LEGLDIDELK
AFLQEQLRNA YDLKEAQIEE QKPGLMKEAE RFFILQQIDT LWREHLQAMD ALRESVGLRG
YGQKDPLIEY KNEGYDMFLE MMTNMRRNVI YSMFMFQPAP ESDKE