Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_16641 |
Symbol | rplF |
ID | 5731872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | - |
Start bp | 1497117 |
End bp | 1497656 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641286044 |
Product | 50S ribosomal protein L6 |
Protein accession | YP_001551549 |
Protein GI | 159904205 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAGAA TTGGTAAACA ACCCATCCCA GTCCCTGAGA AAGTTGCTGT CGAACTAGAT GGACTTTCTT TAACAGTTAA AGGACCTAAG GGAGAGCTTA GTAGAACTCT TCCAGAAGGA GTCAGCATTA GTCAGGTTGA TAATTCTATT GTTGTTTCGG CAATCAATTC AAAAAGAAAG TCGCGAGAAC GTCATGGCTT GTCTCGTTCT TTAGTAGCCA ATATGGTGGA AGGAGTTAGT AAAGGTTATT CAAAAAAATT AGAAATCGTA GGTGTTGGAT CTCGAGCTCA GGTTAAAGGT AAGAATCTAA TCGTAAGTGC TGGATACAGT CACCCGGTAG AAGTTATTCC TCCAGATGGA ATTACTTTTG TGGTTGAAAA TAATACAAAT GTGACAGTAT CAGGCATCGA CAAGGAACTT GTTGGTAATG AAGCTGCAAA AATACGAGCA ATTCGTCCAC CTGAACCTTA TAAAGGTAAA GGTATTAAGT ATGCTGGTGA GCGAATAATT AGAAAGGCTG GTAAGTCAGG TAAGAAATAG
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Protein sequence | MSRIGKQPIP VPEKVAVELD GLSLTVKGPK GELSRTLPEG VSISQVDNSI VVSAINSKRK SRERHGLSRS LVANMVEGVS KGYSKKLEIV GVGSRAQVKG KNLIVSAGYS HPVEVIPPDG ITFVVENNTN VTVSGIDKEL VGNEAAKIRA IRPPEPYKGK GIKYAGERII RKAGKSGKK
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