Gene P9211_16641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_16641 
SymbolrplF 
ID5731872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp1497117 
End bp1497656 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content39% 
IMG OID641286044 
Product50S ribosomal protein L6 
Protein accessionYP_001551549 
Protein GI159904205 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0097] Ribosomal protein L6P/L9E 
TIGRFAM ID[TIGR03654] ribosomal protein L6, bacterial type 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAGAA TTGGTAAACA ACCCATCCCA GTCCCTGAGA AAGTTGCTGT CGAACTAGAT 
GGACTTTCTT TAACAGTTAA AGGACCTAAG GGAGAGCTTA GTAGAACTCT TCCAGAAGGA
GTCAGCATTA GTCAGGTTGA TAATTCTATT GTTGTTTCGG CAATCAATTC AAAAAGAAAG
TCGCGAGAAC GTCATGGCTT GTCTCGTTCT TTAGTAGCCA ATATGGTGGA AGGAGTTAGT
AAAGGTTATT CAAAAAAATT AGAAATCGTA GGTGTTGGAT CTCGAGCTCA GGTTAAAGGT
AAGAATCTAA TCGTAAGTGC TGGATACAGT CACCCGGTAG AAGTTATTCC TCCAGATGGA
ATTACTTTTG TGGTTGAAAA TAATACAAAT GTGACAGTAT CAGGCATCGA CAAGGAACTT
GTTGGTAATG AAGCTGCAAA AATACGAGCA ATTCGTCCAC CTGAACCTTA TAAAGGTAAA
GGTATTAAGT ATGCTGGTGA GCGAATAATT AGAAAGGCTG GTAAGTCAGG TAAGAAATAG
 
Protein sequence
MSRIGKQPIP VPEKVAVELD GLSLTVKGPK GELSRTLPEG VSISQVDNSI VVSAINSKRK 
SRERHGLSRS LVANMVEGVS KGYSKKLEIV GVGSRAQVKG KNLIVSAGYS HPVEVIPPDG
ITFVVENNTN VTVSGIDKEL VGNEAAKIRA IRPPEPYKGK GIKYAGERII RKAGKSGKK