| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_16241 |
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| Symbol | rne |
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| ID | 5731188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9211 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009976 |
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| Strand | + |
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| Start bp | 1458474 |
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| End bp | 1460348 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641286003 |
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| Product | ribonuclease E/G |
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| Protein accession | YP_001551509 |
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| Protein GI | 159904165 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAGA AAGTTGTCAT CGCTGAGCAA GTGCGTATAG CGGCCTTGCT TACCGATGAG
CGAGTGGACG AGTTAATCGT CGCCCAAGGT CACTACCAAA TCGGAGACAT CTATTTAGGG
ACAATAGAGA ATGTCCTTCC AGGAATAGAT GCAGCCTTTG TAAATATAGG AGCAAGTGAA
AAAAATGGAT TTATTCATGT CACTGATCTT GGTCCATTAA GACTCAAGAA ACACGCTGCC
GGAATCAATG AGCTACTTGA GCCTCGACAA AAGGTCTTGG TTCAGGTCAT GAAAGAACCA
ACTGGCTCTA AAGGCCCAAG ACTAACCGGT AATCTTGCCT TACCAGGAAG ATATCTGATA
CTTCAACCAA ACGGACAAGG GGTAAATATT TCACGTAAAA TCAACTCAGA AAATGAACGT
AATCGATTAA GAGCTCTCGG TGTATTAATC AAACCACCTG GAACAGGTCT CTTAATACGT
TCAGAGGCAA AAGGAATTAA TGAAGAGCTC TTAATAACTG ATCTTGAAGC TCTTCTAAAG
CAATGGGAAT CAATTCAACA AGCCTCAGAG CAGTCAAGCC CTCCAGTACT TTTAAATAGA
GAAGAAGATT TTATCAATAG AATCCTTAGA GATCATGTTA GCCCCGAGCT AACAAGTGTA
ATCGTTGAAA CTCCTGGAGG TGTTGAAAGG GCTAAGGGAT TTCTAGGAGT AGATTCAAAT
ATCATTGTCG AGTCTCATGA TCAACCAACG AATTTACTTG ATCATTACAA GATAAATAAA
ACTATATTTG AGTCTTTAAA GCCAAGAGTA GAGCTTCCGT CAGGTGGCTA TATCATCATC
GAACCTACAG AAGCTTTGAC GGTAATCGAT GTAAATTCAG GGTCTTTTAC ACGTTCATCT
AATTCTCGAG AAACAGTTCT TTGGACAAAT TGTGAAGCAG CAATAGAAAT AGCAAGACAA
TTAAAACTCC GCAATATTGG TGGTGTAATT ATTATTGACT TCATTGACAT GGAGTCACGC
AGGGATCAAC TGCAATTACT CGAGTACTTT ACTTCTGCAA TCAAGAATGA CTCTTCAAGA
CCTCAAATAG CTCAATTAAC TGAGCTTGGT TTAGTTGAAC TCACTAGGAA AAGACAAGGT
CAGAATATCT ATGAGTTATT TAGTAAAACC TGCACTACTT GCAATGGGCT CGGGCATACT
GCAGAGATCC CAGGCAAAGA AGAGATACAA ACATCGGCAA CTATAGGTGG GTTGATACAA
ACAGAAGATT CTTCGAAAAA AATACTGCCA TCGAAAGAAG TTATTAGCAA AGCAAAAAAT
CCCGATCTTG CTCAGGAAAG TGAATCATCA ACATTGGCAA TTAATTCTGA AGCAAACAAT
CAAGAAAGCG AATCTGAATC GACAAACCCT AGGCAAGAAC CTGAACTAAT TGCTGTAAAT
ATGAGCCCTG ATGAAGAATA TGTTTTTAGC TCTTTAGGCC TTAATCCAAT TCTTTTACTA
GAGACGCAGC CTACAAATGA GAATTTATCA GTTCATGTAG TTAGACCTGG CGAAGACGCA
AAGAATATCC TGGAAGAGGC CAAACAACAA CTTTCACAGA ATACGAATAA GCGCAGAAGA
AAAACAAAAA ACGGTGCAAG TCGCAGTACT AAAACAACTC TAGAAAACTC TTTATTAGTC
AACAATCAAG AAGTTATAAC AGCTTCAGAA GACGAAGTCC TCATAGATAT TGCCAAAGAA
GATACACCGA ATAATATGCC CGAAAACATT GGTTCTGTTG AAGAATTAGA ACGTGTAGAC
GACGAAAAAA TATCTCCAGA AGGTGAGTTA GATGACTCGA GAAGACGCAG ACGAAGATCC
TCTGCTTCAA ATTAA
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| Protein sequence | MPQKVVIAEQ VRIAALLTDE RVDELIVAQG HYQIGDIYLG TIENVLPGID AAFVNIGASE
KNGFIHVTDL GPLRLKKHAA GINELLEPRQ KVLVQVMKEP TGSKGPRLTG NLALPGRYLI
LQPNGQGVNI SRKINSENER NRLRALGVLI KPPGTGLLIR SEAKGINEEL LITDLEALLK
QWESIQQASE QSSPPVLLNR EEDFINRILR DHVSPELTSV IVETPGGVER AKGFLGVDSN
IIVESHDQPT NLLDHYKINK TIFESLKPRV ELPSGGYIII EPTEALTVID VNSGSFTRSS
NSRETVLWTN CEAAIEIARQ LKLRNIGGVI IIDFIDMESR RDQLQLLEYF TSAIKNDSSR
PQIAQLTELG LVELTRKRQG QNIYELFSKT CTTCNGLGHT AEIPGKEEIQ TSATIGGLIQ
TEDSSKKILP SKEVISKAKN PDLAQESESS TLAINSEANN QESESESTNP RQEPELIAVN
MSPDEEYVFS SLGLNPILLL ETQPTNENLS VHVVRPGEDA KNILEEAKQQ LSQNTNKRRR
KTKNGASRST KTTLENSLLV NNQEVITASE DEVLIDIAKE DTPNNMPENI GSVEELERVD
DEKISPEGEL DDSRRRRRRS SASN
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