Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_15781 |
Symbol | ccdA |
ID | 5731287 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | + |
Start bp | 1407836 |
End bp | 1408468 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641285956 |
Product | putative c-type cytochrome biogenesis protein CcdA |
Protein accession | YP_001551463 |
Protein GI | 159904119 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0785] Cytochrome c biogenesis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0899823 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTTGCTA TAGCATTCTG CAGCGGACTT CTCACCAGCT TAGGTCCATG TTCATTATCA CTTTTGCCAA TAACCGTTGC CTACCTAGCA GGGTTCAAAG GTAAGCAAAA TCCCTTGCAA AGAAGTTTGA TCTTTTCAAG CGGTATTGTC TTATCTTTAG TAATTCTTGG TTCCCTAAGC GGGTTATTCG GACAAATCTA TGGGCAACTT TCTTCCAAAT TAAATGGCTT GGTTTCAATA ATTGCAATAG TAATGGGTTT AAGCCTTCTA GGGATAATCG ATATAAAGCT TCCAATTAAT CCAAATCCAA ACCTTTTAAC AGAGAAACTT CCTGAGCCCC TAGCCCCTAT AGCAGCAGGA GTTGTCTTTG GCATGGCCTC CTCACCTTGT ACCACACCAG TATTGGCTGT TCTATTAGCT TGGATTGCTC AGAATGGGAA TCCAGTCACA GGAATAATTC TTCTAGCATT CTTTGGCGCA GGTCAAGTAA TACCTCTGGT TTTGGCAGGT ATAGCTGCAG GCAGCATCCC AAATTTACTG GCATTGAAAC CTTTTAGTCG TTGGATTCCT ATTGCTAGCG GCATTATTTT TCTATCCACA GGTTCTTTAA GTCTCATTAG CAGGTGGGTT TGA
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Protein sequence | MLAIAFCSGL LTSLGPCSLS LLPITVAYLA GFKGKQNPLQ RSLIFSSGIV LSLVILGSLS GLFGQIYGQL SSKLNGLVSI IAIVMGLSLL GIIDIKLPIN PNPNLLTEKL PEPLAPIAAG VVFGMASSPC TTPVLAVLLA WIAQNGNPVT GIILLAFFGA GQVIPLVLAG IAAGSIPNLL ALKPFSRWIP IASGIIFLST GSLSLISRWV
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