Gene P9211_14121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_14121 
SymbolmurD 
ID5731836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp1277687 
End bp1279060 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content38% 
IMG OID641285789 
ProductUDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 
Protein accessionYP_001551297 
Protein GI159903953 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase 
TIGRFAM ID[TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0237832 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTGGAC TAGGCCGTTC AGGCTTAGGA GCAGCAAAGC TTCTCAACGA GCAAGGAGCA 
AATGTTGTTG TGTTTGAACA ATCCAATGGG CCTTCCTTGG AGGCATTATC TAAAGAACTA
AATAATCAAG GTATTGATGT AAAGCTTGGC GTATCACTTG AGTTAAAGAG TTTTGAACCA
TGGCTCTCGA ATTTAAAATC AGTAGTGACT AGCCCTGCAA TCGCATGGGA CCATTGCACC
CTAAATGCAT TAAGAAACAA AGGCATTGAA ATTGAAAGTG AGATTTCCTT GGCATGGAAA
GCTTTAAAAC ATATTCCTTG GATAGGTGTT ACTGGGACAA ATGGCAAAAC AACTGTTACT
CATATGCTCC ATCATGTTTT GAATAGCAAT CAAATCAATA CAGCGATGGG AGGGAATGTT
GGAATACCAG CATCCCAAAT AGCGTTGGAT TCTATAAGGT CCTCAAGAAC GGAACCCAAC
TGGTTAGTAA TGGAATTAAG CAGCTATCAA CTAGAAACAA GTCCTAATAT CTCACCCAAA
ATAGGAATTT GGACAACTCT TACCCCCGAT CATCTAGAAA GACATGGATC ACTTGAAAAC
TATTCCGATA TAAAAAAAAG ACTTCTAGAA AACTCTTCTA TTCGTATTTA TAACCTAGAT
GATCATTTCC TGAAGAACGC TCGATCGAAA CTAATGGAGG GGATTTGGGT TAGCACTAAT
GGAGCTGCAA TAAATAATAA TCAAGCCGAC TTCTGGATAA CCTCGAAAGG AAAGCTATAT
GAAAAAGGTG AAGAGATATT AGATACTACT TTGCTAAACA TACCTGGAAG GCACAATCTA
CAAAATCTTT TATTAGTAAC AGCTGCAGCA AGAGAAATAG GTTTATCGCC AAGAGATATT
GAACAAGCAA TTGCATCTTT TAAAGGCGTA CCTCATCGAT TAGAGAAGAT TGCAAATATA
AAAGGTATAG AGATTTTTAA TGACAGCAAA GCCACTAATT ATGAAGCCGC TAAAATAGGT
CTTGAAGCAG TCCCATCTCC TACAATAGTT ATCGCAGGAG GTCAAAGCAA AAAAGGCAAC
CCCAATGACT GGTTGCAAGC GTTAAATAAA AAAGCTTGCG CAGTTGTTCT CTTTGGCGCT
AGCGCTAATA CTCTTTTCGA CCTTATCCGA GACTCAAAAT TTTCAGGTCC TGTCAATTGT
TTCCCATCAC TTAATGATGC GATTGAAACA GTTTTCAATC TTGCCTTTGA GGAAAAAGCA
AAAAGTATTT TATTATCACC AGCATGCGCA AGCTTCGACC AATATAAAGA CTACGAAGAG
CGAGGTAATG AATTTAAAAA GATAATCAAT CAATGGCTAA TCCTTAATTC CTAG
 
Protein sequence
MVGLGRSGLG AAKLLNEQGA NVVVFEQSNG PSLEALSKEL NNQGIDVKLG VSLELKSFEP 
WLSNLKSVVT SPAIAWDHCT LNALRNKGIE IESEISLAWK ALKHIPWIGV TGTNGKTTVT
HMLHHVLNSN QINTAMGGNV GIPASQIALD SIRSSRTEPN WLVMELSSYQ LETSPNISPK
IGIWTTLTPD HLERHGSLEN YSDIKKRLLE NSSIRIYNLD DHFLKNARSK LMEGIWVSTN
GAAINNNQAD FWITSKGKLY EKGEEILDTT LLNIPGRHNL QNLLLVTAAA REIGLSPRDI
EQAIASFKGV PHRLEKIANI KGIEIFNDSK ATNYEAAKIG LEAVPSPTIV IAGGQSKKGN
PNDWLQALNK KACAVVLFGA SANTLFDLIR DSKFSGPVNC FPSLNDAIET VFNLAFEEKA
KSILLSPACA SFDQYKDYEE RGNEFKKIIN QWLILNS