Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_14091 |
Symbol | serA |
ID | 5731775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | - |
Start bp | 1274453 |
End bp | 1276039 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641285785 |
Product | D-3-phosphoglycerate dehydrogenase |
Protein accession | YP_001551294 |
Protein GI | 159903950 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.187324 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0498894 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGAAAG TTTTGGTTTC TGATCCCATA GATCAGGCAG GCATCGAGAT CCTTAGTCAG GTAGCTCAAG TTGATCAACG TATAGATCTT TCAAATGAAC AATTGAAGGA GGTTATCAGT GAATATGAAG CACTGATGAT TCGATCTGGC ACACAAGTCA CCTCTGAGGT TATAGAAGCT AGTGATCGAT TACGCATTAT TGGTAGAGCT GGTGTTGGAG TGGACAATGT TGATGTCCCT GCGGCAACTA AGCGAGGGGT TTTAGTAGTA AATTCTCCTG GTGGAAATAC GATTGCTGCT GCAGAGCATG CACTTGCCTT GCTTCTAGCT CTTTCCCGAA ATATTCCTCA AGCTCACTCG AGTACTTTTG GCGGCCTATG GGAAAGAAAG AAATATGTTG GTAATGAACT TTATAAAAAA ATCTTAGGAG TAGTTGGGCT TGGAAAGATC GGCTCTCATG TCGCAAAAGT AGCTAATGCA ATGGGGATGG AGGTTATTGC TTTTGATCCT TTTGTATCTG CTGATCGAGC CCAGCAAATG CAAGTCAGGC TTAGTTCAAT TGACAACCTT TTCGAAGAAG CCGACTACAT AACACTTCAT CTGCCAAGAA CACCGGAAAC CGAAAACTTA GTTAATGCTC AATTGCTCTC AACTATGAAG AGCACTGCAA GATTGGTGAA TTGCGCAAGA GGCGGAATTA TTGATGAAGC AGCTTTGGCA GATGCATTGA ATTCTGAAGT CATAGCGGGT GCTGCATTGG ATGTATATGC AGAAGAACCA CTGAAAAAAG ATTCCCCTTT GCTTTCTGTT AATAAAGGCC TAATTCTCAC ACCTCATTTG GGTGCTTCTA CTGCTGAGGC TCAAGAGAAT GTTGCTATAG ATGTTGCGGA GCAGATTCGT GATGTTTTAT TAGGTTTGCC TGCTCGCAGC GCTGTAAATA TTCCTGGATT AAGTGCTGAA ATCATGGATA GCCTAAAGCC TCATTTACAG CTTGCCGAAA CGCTTGGATT ATTAGCCAGC CAGATCTCTG GAGGGCATAT ACAGAAATTA GAAGTTCGTT TGCAGGGAGA ATTTGCTCAA CATCCTTCTC AACCTTTAGT AGTAGCCACT TTAAAGGGAC TTCTTTCTAC AGCCTTAGGT GACAGGATCA ATTATGTAAA TGCTTCTTTA GAAGCTAAAG GTAGGGGAAT CAATGTCTTA GAAGTGAAAG ATGAGAGTTG TCCTGATTTC TCTGGGGGAT CACTTCAGTT AACTACGGTC GCAGATGACG GGAGTCATAG CTTGGCTGGA ACAGTCTTCG CTGATGGTGA TTTACGTATA ACTTGTATAG ATGAATTCCC TGTCAATGTA GCTCCAAGTA GGCATATGCT TTTTACGAGG CATCGGGATA TGCCTGGCAT AATTGGAAAG ATTGGATCTT TGCTTGGTGT TCATAATGTG AATATTGCGT CAATGCAAGT TGGAAGACGC ATAGTTAGGG GAGAAGCAGT AATGGTGCTG AGTATTGATG ATCCAATTCC ATCAGAACTT TTGAAGTCTA TTCTTCAAAT CCAAGGTATT AATGAGGCAC ATCCAGTAAC TTTATAG
|
Protein sequence | MTKVLVSDPI DQAGIEILSQ VAQVDQRIDL SNEQLKEVIS EYEALMIRSG TQVTSEVIEA SDRLRIIGRA GVGVDNVDVP AATKRGVLVV NSPGGNTIAA AEHALALLLA LSRNIPQAHS STFGGLWERK KYVGNELYKK ILGVVGLGKI GSHVAKVANA MGMEVIAFDP FVSADRAQQM QVRLSSIDNL FEEADYITLH LPRTPETENL VNAQLLSTMK STARLVNCAR GGIIDEAALA DALNSEVIAG AALDVYAEEP LKKDSPLLSV NKGLILTPHL GASTAEAQEN VAIDVAEQIR DVLLGLPARS AVNIPGLSAE IMDSLKPHLQ LAETLGLLAS QISGGHIQKL EVRLQGEFAQ HPSQPLVVAT LKGLLSTALG DRINYVNASL EAKGRGINVL EVKDESCPDF SGGSLQLTTV ADDGSHSLAG TVFADGDLRI TCIDEFPVNV APSRHMLFTR HRDMPGIIGK IGSLLGVHNV NIASMQVGRR IVRGEAVMVL SIDDPIPSEL LKSILQIQGI NEAHPVTL
|
| |