| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_14011 |
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| Symbol | truB |
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| ID | 5731417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9211 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009976 |
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| Strand | + |
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| Start bp | 1268179 |
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| End bp | 1269108 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641285777 |
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| Product | putative tRNA pseudouridine 55 synthase |
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| Protein accession | YP_001551286 |
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| Protein GI | 159903942 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.276631 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATGCCA AGTTTGGCTT CTTAGTCATA GACAAACCAG CAGGGGTTAC TTCTCATGAC
TGTGTTAGTA GGCTTCGAAA AATTTTGAGA ATAAAACGAG TTGGGCATGG GGGAACACTC
GATCCATTAG TAACTGGGGT ATTGCCTATA GCAATTGGTA AGGCGACAAG GCTTTTGCCT
TATTTACATA CATCGAAAAA GTATCAAGGC ACAATCCAAC TCGGAGAAAG AACTAATACC
GATGACCTAG AGGGAGAAAC AATCAAAAGT AGTCCCTGGC CACAATTAAG TGAAGCCGAT
CTAGATAAAT TTCTAGATTT ATTTAGAGGA CGTATTTTTC AAGAGCCCCC TTTATTCTCA
AGTGTTCATA TAAATGGAGA GAGAGCTTAT AAAAAAGCAC GAAAAGGAGA AATATTTGAT
CTGCCTAGAA AAGAAATAAC CATTTACCAG CTAAAGGTTA ATTCTTGGAA TCAGAGTACT
GGAAGATTAG ATTTATATAT TCATTGTTCT TCAGGCACAT ATATCCGCTC TTTAGCAAGA
GACCTAGGAG AAAATATAGG ATGTGGAGGT ATGTTATTTA AACTAAGGAG ATTAGAAGCT
TTAGGTTTCA ATGAAGACGA AGTAATACCA TTACCAGATC TTAATTATAA TAAGGAAAAG
TTGCTTTCAA AAGTTGTTGA TCCTATTCTC TCATTAAATC ACTTATCTAA ATTCCGACTA
AAGTGTGAAG AAGATTTTTA CTGGAGAAAC GGTCGTAAAA TAATTACTTC AAATAGCCGT
ATTGAGGTAT CTAAAATTAT TGAGAAAGGT GAATTAAATT CATATAAAAA TTTTTTATTG
GTTATCAATA ATGACTATTC TATAGCAGGG ATTGCTGAAT GGGTCGATGA TTCAATAATT
CAGCCAAAAG TAGTCTTAAA TCCACTCTAA
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| Protein sequence | MDAKFGFLVI DKPAGVTSHD CVSRLRKILR IKRVGHGGTL DPLVTGVLPI AIGKATRLLP
YLHTSKKYQG TIQLGERTNT DDLEGETIKS SPWPQLSEAD LDKFLDLFRG RIFQEPPLFS
SVHINGERAY KKARKGEIFD LPRKEITIYQ LKVNSWNQST GRLDLYIHCS SGTYIRSLAR
DLGENIGCGG MLFKLRRLEA LGFNEDEVIP LPDLNYNKEK LLSKVVDPIL SLNHLSKFRL
KCEEDFYWRN GRKIITSNSR IEVSKIIEKG ELNSYKNFLL VINNDYSIAG IAEWVDDSII
QPKVVLNPL
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