Gene P9211_12871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_12871 
Symbol 
ID5730955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp1161409 
End bp1162116 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content30% 
IMG OID641285657 
ProductCMP-N-acetylneuraminic acid synthetase 
Protein accessionYP_001551172 
Protein GI159903828 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1083] CMP-N-acetylneuraminic acid synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0341176 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAAAG GAAATCTACC AAGAGTCATA GCGGTTGTAC CAGTCAAAAA GGTTTCCGAG 
AGAGTACCTA ATAAAAACTT TAGAGAATTT ACCAAAGATG GTTCTTCTCT ATTAGATATA
CTTTTAGAGA AGTTATTAAA GATAAAGACT GTAGATCATA TATACATTAG TACAAACTAT
CAAGATTTAA GCATTGAAAG CGATAATAAA ATCAGTCTTA TAGACCGAGA TGATACTTAT
TGCAATAACA TAACTTCTTG GAGTGATGTT ATCTATAATA TAGTTAACTC TATTCCTGAA
GATGATAACT CAATAATACT ATGGTGTCAT ACAACAACAC CACTTTTCGA TGAGTACCAA
AAAGCATTGA ATAAATTTAT AGACCTAGAT AAAAATAATT TCAATTCTTT AGTAGTTGTA
GAAAAACTTA AAGAATTTAT TATAGATGAT AAGGGCAGGC CCTGGAATTA TTCCTATGGA
GTATGGCATC CCTATTCACA GAATCTACCT TCCCTATACA AAATATCAGG TTCTTTATTC
ATAAATTATC TTGCGGAAAT GAAAAAGACT AGATACGTTA TAAATACAAA GCCATTCTTA
TATGAAATTG ATTCAAAGTA TGGAATTGAC ATTGATACAA AATGGGAGTT TAAGATGGCA
CAAATTCTGA ATGACAACAA AAATGAACTT AATAATATTG AGAAATGA
 
Protein sequence
MYKGNLPRVI AVVPVKKVSE RVPNKNFREF TKDGSSLLDI LLEKLLKIKT VDHIYISTNY 
QDLSIESDNK ISLIDRDDTY CNNITSWSDV IYNIVNSIPE DDNSIILWCH TTTPLFDEYQ
KALNKFIDLD KNNFNSLVVV EKLKEFIIDD KGRPWNYSYG VWHPYSQNLP SLYKISGSLF
INYLAEMKKT RYVINTKPFL YEIDSKYGID IDTKWEFKMA QILNDNKNEL NNIEK