Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_12601 |
Symbol | glyQ |
ID | 5731385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | - |
Start bp | 1134633 |
End bp | 1135514 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641285629 |
Product | glycyl-tRNA synthetase subunit alpha |
Protein accession | YP_001551145 |
Protein GI | 159903801 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0752] Glycyl-tRNA synthetase, alpha subunit |
TIGRFAM ID | [TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.879707 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00432496 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCACTTTC AGGACATTAT TTCTTCCCTC AACTCCTTTT GGAGCAAACA AGGTTGTTTG CTTTTGCAGC CTTATGACAC TGAAAAGGGA GCAGGTACGA TGAGCCCACA TACTTTTTTG AGAGCTATTG GCCCAGAGCC CTGGGCTGTG GCTTATCCGG AGCCTTGTCG CAGACCAACT GATGGAAGAT ATGGTGATAA CCCTAATCGA GCTCAGCATT ATTTTCAGTA TCAAGTATTG ATAAAACCAT CCTTTGATGG GATTCAGGAA ACATACCTTT CATCCTTGGA AATCATTGGC ATTGATCCAA AGGATCATGA TATTCGTTTC GTTGAAGACA ATTGGGAGTC TCCAACCTTA GGTGCCTGGG GAGTTGGATG GGAAGTATGG CTTGATGGAA TGGAAGTGAC TCAATTCACT TATTTCCAGC AGTGTGGAGG CTTGGATTGC AAGCCTGTAT CTATTGAGAT CACCTATGGC TTGGAAAGAT TAGCAATGTA TCTTCAAAAT GTAGATTGCA TTTGGGATCT CAGTTGGAAT CAAACTTATA AATATGGAGA TATTTGGCTT GATTTAGAAA AAAGTAATTG TAAATATAAT TTTGAGTTCT CTAATCCCAA AAGATTAAAA GAGCTTTTTG AGATTTATGA GGGTGAGGCC TCGGATCTCG TTCTAAATAA ACTCCCAGGA CCTGCTTTAG ATTTTGTGCT GAAATGTAGC CATACATTTA ACCTTTTAGA AGCAAGAGGT GTTATTTCAG TTACTGAAAG GACCTCAACG ATTGGAAGAA TTCGCAATTT AGCGCGTAAA GTTGCTGAAT TATGGCTAGA GGAGAGGCAA GCCCTTGGAT TTCCCCTCCT CGAGGGCGAT GCGAAGGAAT AA
|
Protein sequence | MHFQDIISSL NSFWSKQGCL LLQPYDTEKG AGTMSPHTFL RAIGPEPWAV AYPEPCRRPT DGRYGDNPNR AQHYFQYQVL IKPSFDGIQE TYLSSLEIIG IDPKDHDIRF VEDNWESPTL GAWGVGWEVW LDGMEVTQFT YFQQCGGLDC KPVSIEITYG LERLAMYLQN VDCIWDLSWN QTYKYGDIWL DLEKSNCKYN FEFSNPKRLK ELFEIYEGEA SDLVLNKLPG PALDFVLKCS HTFNLLEARG VISVTERTST IGRIRNLARK VAELWLEERQ ALGFPLLEGD AKE
|
| |