Gene P9211_12601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_12601 
SymbolglyQ 
ID5731385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp1134633 
End bp1135514 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content41% 
IMG OID641285629 
Productglycyl-tRNA synthetase subunit alpha 
Protein accessionYP_001551145 
Protein GI159903801 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0752] Glycyl-tRNA synthetase, alpha subunit 
TIGRFAM ID[TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.879707 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00432496 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCACTTTC AGGACATTAT TTCTTCCCTC AACTCCTTTT GGAGCAAACA AGGTTGTTTG 
CTTTTGCAGC CTTATGACAC TGAAAAGGGA GCAGGTACGA TGAGCCCACA TACTTTTTTG
AGAGCTATTG GCCCAGAGCC CTGGGCTGTG GCTTATCCGG AGCCTTGTCG CAGACCAACT
GATGGAAGAT ATGGTGATAA CCCTAATCGA GCTCAGCATT ATTTTCAGTA TCAAGTATTG
ATAAAACCAT CCTTTGATGG GATTCAGGAA ACATACCTTT CATCCTTGGA AATCATTGGC
ATTGATCCAA AGGATCATGA TATTCGTTTC GTTGAAGACA ATTGGGAGTC TCCAACCTTA
GGTGCCTGGG GAGTTGGATG GGAAGTATGG CTTGATGGAA TGGAAGTGAC TCAATTCACT
TATTTCCAGC AGTGTGGAGG CTTGGATTGC AAGCCTGTAT CTATTGAGAT CACCTATGGC
TTGGAAAGAT TAGCAATGTA TCTTCAAAAT GTAGATTGCA TTTGGGATCT CAGTTGGAAT
CAAACTTATA AATATGGAGA TATTTGGCTT GATTTAGAAA AAAGTAATTG TAAATATAAT
TTTGAGTTCT CTAATCCCAA AAGATTAAAA GAGCTTTTTG AGATTTATGA GGGTGAGGCC
TCGGATCTCG TTCTAAATAA ACTCCCAGGA CCTGCTTTAG ATTTTGTGCT GAAATGTAGC
CATACATTTA ACCTTTTAGA AGCAAGAGGT GTTATTTCAG TTACTGAAAG GACCTCAACG
ATTGGAAGAA TTCGCAATTT AGCGCGTAAA GTTGCTGAAT TATGGCTAGA GGAGAGGCAA
GCCCTTGGAT TTCCCCTCCT CGAGGGCGAT GCGAAGGAAT AA
 
Protein sequence
MHFQDIISSL NSFWSKQGCL LLQPYDTEKG AGTMSPHTFL RAIGPEPWAV AYPEPCRRPT 
DGRYGDNPNR AQHYFQYQVL IKPSFDGIQE TYLSSLEIIG IDPKDHDIRF VEDNWESPTL
GAWGVGWEVW LDGMEVTQFT YFQQCGGLDC KPVSIEITYG LERLAMYLQN VDCIWDLSWN
QTYKYGDIWL DLEKSNCKYN FEFSNPKRLK ELFEIYEGEA SDLVLNKLPG PALDFVLKCS
HTFNLLEARG VISVTERTST IGRIRNLARK VAELWLEERQ ALGFPLLEGD AKE